Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq4404 280 1e-70
seq1169 246 2e-60
>seq4404
Length=3800
Score = 280 bits (310), Expect = 1e-70
Identities = 390/546 (71%), Gaps = 3/546 (1%)
Strand=Plus/Plus
Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458
|||||||| || ||||| || || || || || || || || |||||||| || ||||
Sbjct 2496 TTCAATGCAATTGAGACCATGCCCGCTGTTAAACGCAAGGCTGATTGGGCGCTCTCTTGG 2555
Query 61459 ATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGT 61518
|| | | | | |||| || ||||| || | | || ||||| | |||||||||
Sbjct 2556 ATTTCATCGAAATCAGCTAATTTCGGTGAGAGAATTATTGCCTTTGCTGCGGTCGAGGGC 2615
Query 61519 GTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCC 61578
|||| || ||||| ||||| | ||||||||| ||||||||||||| ||||||||
Sbjct 2616 ATATTCTTTAGTGGCAGTTTTGCGTCCATCTTTTGGCTGAAGAAACGTGGCCTTATGCCT 2675
Query 61579 GGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCT 61638
||| | || ||| |||||| || || || || || || || | || ||||| ||||||
Sbjct 2676 GGTTTAACATTCTCCAATGAATTAATTTCGCGTGATGAAGGTTTACACTGTGACTTTGCT 2735
Query 61639 GTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATT 61698
||| | | ||| | | || ||||| | ||||| | | |||||| | ||| ||
Sbjct 2736 GTTCTTATGTTCCATC---ATTTGGTGCAGCGTCCAACCAAAGAGCGTATTATTGAAATC 2792
Query 61699 GTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTC 61758
|| ||||| || | || || |||||||| |||| || || ||||| || ||
Sbjct 2793 ATTTCGGAGGCAGTCAAAATAGAGCAGGAATTCTTGACCGATGCATTGCCGGTTAACCTG 2852
Query 61759 ATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTG 61818
|| |||||||||||| ||| |||||| | |||||||| ||||| || || || || |
Sbjct 2853 ATTGGCATGAATTGTAAACTGATGTCGGAATATATTGAGTTTGTCGCTGATCGCCTACTA 2912
Query 61819 GTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATG 61878
|| || | || || ||||| || || || || ||||| |||||||| ||
Sbjct 2913 GTTGAACTCGGCGTGGGCAAAATCTACAACACAAAGAATCCATTCACATTCATGGAATTG 2972
Query 61879 ATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAACGTTTG 61938
||||||||||| ||||||||||| |||||||||||| |||||||| |||||||| ||
Sbjct 2973 ATTTCGCTGGACGGCAAGACGAACTTTTTCGAGAAAAAAGTAGGCGAATATCAACGCATG 3032
Query 61939 GGTGTA 61944
||||||
Sbjct 3033 GGTGTA 3038
Score = 167 bits (184), Expect = 2e-36
Identities = 205/280 (73%), Gaps = 14/280 (5%)
Strand=Plus/Plus
Query 61104 AAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGA 61163
|||||| || || || |||||||| || ||||| || ||| |||| || ||| ||| ||
Sbjct 2133 AAAGGCAGAGGCATCATTCTGGACAGTTGAGGAAGTAGATCTGTCGAAGGACTTGACAGA 2192
Query 61164 CTGGG---AGCGTT----TATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGT 61216
|||| ||| | || |||||| |||||||| || |||||||| |
Sbjct 2193 TTGGGCTAAGCTTACTGATAACGAGCGT-------CATTTCATATCGCACGTGTTGGCTT 2245
Query 61217 TCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGG 61276
||||||| ||||| || || || || ||||| ||||| | || |||||| || || |
Sbjct 2246 TCTTTGCTGCTTCCGATGGCATTGTGAATGAAAATTTGGTCGAGCGTTTCAGCCAAGAAG 2305
Query 61277 TGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACT 61336
| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| ||||
Sbjct 2306 TTCAAGTGACTGAGGCACGTTGCTTCTATGGCTTCCAAATTGCCATGGAAAATGTGCACT 2365
Query 61337 CGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
| || ||||| || ||| | ||||| || || || || ||
Sbjct 2366 CCGAAATGTATAGCGTTTTAATCGACACCTATATAAGAGA 2405
>seq1169
Length=8375
Score = 246 bits (272), Expect = 2e-60
Identities = 993/1559 (64%), Gaps = 45/1559 (3%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| || || || || || ||||| || |||| ||| || | | ||| ||||| || ||
Sbjct 825 TCTACAGTAAATTGTATAGCATTTGCTGCCGGCTTTGTGCGTAAATAATACATTCCAGTT 884
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197
|| || || || ||| | ||| || || || || | ||||| ||||||| || |||
Sbjct 885 TTAAGACCTGCTTTCCATGAATAAAAGTGTATTGAAGTCAATTTACCATAATTTGGTTCG 944
Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257
|| ||||| ||||| || ||||| || || || ||| || || | ||||||||||||
Sbjct 945 GCGACATGTATATTGAATGACTGGCTTTGGTCAATGAAAGCTCCTCTATCTGCAGCCATT 1004
Query 65258 TCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATT 65317
| || | | | || ||||||||||| || || || | | | || || |
Sbjct 1005 TTTATTGTTGATTTTACAGAAATCTCCCAGACAGTTTTATATAAGTCTCTGACATCTTTA 1064
Query 65318 GGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGAC 65377
||||| ||||| | || | |||||||||| || | || ||| |||
Sbjct 1065 GGAATTGTTTCAATATGTTGAATAGAACCACGACTTGACACTATATTATTTTTCATATCA 1124
Query 65378 TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAAC 65437
|| ||||||| |||| || | | || | | || | | | || | ||||| |||
Sbjct 1125 TCATCCCACAAATCCAATTCAGTTAAATCACGTAATAAATAATGGTTAACAACTTGAAAC 1184
Query 65438 TCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTG 65497
|| || || | || | | | || || || || ||| ||||||||| |||||| |
Sbjct 1185 TCTCCAGATAAAACCCTTCTGGTGTATATATTTGAAGTGTAGGGTTCAAATGATTCATTA 1244
Query 65498 TTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGC 65557
|| || | ||||| || ||||| || || ||||| || || || | | || ||||
Sbjct 1245 TTTCCCATGATTTGAGCTGTAGAAGCTGTAGGCATTGGTGCTACAAGGAGGGAATTTCTT 1304
Query 65558 AATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA------TCGGTTTA 65611
| ||| | | ||| ||| || | |||| | ||| | ||||| | |||||
Sbjct 1305 ACTCCATACTTTTGAATCTTAAGCTTTAATTGTTGCCAATCCCACAAATTCGTTGGTTTT 1364
Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671
| ||| |||||| || | ||| ||| |||| | || || ||
Sbjct 1365 T-------TTCC-----CCACATGTCATATTGTAGGATTCCTTTGCTTATAGGGCTTCCC 1412
Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731
| | || || || | || | || |||| ||| || | || | |
Sbjct 1413 TCATACGTCTCATAGGGACCATACTTTTCAGCCAGTTCACAACTTGCTTCTAAGGAACTG 1472
Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791
|||| || || || ||||| || |||| | | || || ||||| || || ||
Sbjct 1473 TAATATATCGTTTCAAAAATTTGTTGATTTAAAAGAAAGGCTTCTTCGCTTTCATAGGGA 1532
Query 65792 ATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851
|| ||| | | | || || || | || ||||| ||||| || || ||||||||
Sbjct 1533 TAACGCATTAAAATTAGAGCATCAGCAAAGCCCTGAACGCCAATGCCAATAGGACGATGT 1592
Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911
| ||| || || || ||||| | | ||| || |||||||| || || || |||
Sbjct 1593 CTCAAGTTAGACTTTCGAGCCTCTTGCAAAGGATAATAATTGATGTCAATTATTTTATTT 1652
Query 65912 AAATTGCGTGTCACCACATGCACGATACGTC--GCAATTGTTCGAAATCAAAATGTTTAG 65969
| ||| ||||| || || || ||| || || | |||||||||| | | |||
Sbjct 1653 AGATTTCGTGTTAC--TATTTTCGTTACTTCCTTTAACTTTTCGAAATCATATTTTTT-- 1708
Query 65970 GACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGA 66029
| || || ||||||| | | ||||| ||||| | ||||| |
Sbjct 1709 ------------TTCC-GAGGACACAAACATATTTAAGGCAATCGATGCCAAATTGCATA 1755
Query 66030 CAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTA 66089
| || || || || || || | ||| || |||||||| ||||| | ||||||||| |
Sbjct 1756 CCGCAATTTCATCTGGTGCAGAATATTCTACAATTTCTGTGCATAAATTACTGCATTTAA 1815
Query 66090 TGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACG 66149
||||||| | ||| ||||| || || || | ||| |||| ||| || ||| ||| || |
Sbjct 1816 TGGTGCCAACATTTTGTTGGTTGCTTTTTCTATTACATGAATCTTTAAACAACATATATG 1875
Query 66150 GAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCG 66209
||||||| || || ||||| | ||||| || | |||||||| |||| || |
Sbjct 1876 GAGTGCCAGTTTCTACTTGAGCTTCAATTATAGAAAACCAAAGAGATTGTGCTTTAATTT 1935
Query 66210 TACGTAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268
| | ||| || | ||||| |||| || | ||| || | | ||| || ||||||
Sbjct 1936 TTC-TACTTGCGCGACCTTCTTGTTCATATTTTTCATATAACTTTTCAAACTCGTCACCC 1994
Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328
|| || || || | || || || || |||||||| || ||||| || | ||| |
Sbjct 1995 CAAACATCATGAAGGCCAGGGCATTTATGAGGACACATAAGTGACCACTCTCGATCTTCC 2054
Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388
||||| || |||||| || || || ||||| || ||||| || | ||| || ||||
Sbjct 2055 TCTACTCGTTTCATAAAAAGGTCTGGAATCCAAAGAGCGTAAAATAAATCACGAGCTCTG 2114
Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448
|| || || | || |||||| | || | |||||| || ||||| ||||||||
Sbjct 2115 TGTTCTTCCTTTCCAGTATTTTTTTTTAGATCCAAGAACTCGAAAATGTCTGCATGCCAA 2174
Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508
|| || | || || || || | || | || || || ||||| || || || ||
Sbjct 2175 GGCTCTAAATAAATAGCAAATGCTCCAGGCCTCTTACCACCTCCTTGATCTACATATCGT 2234
Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568
|||||||| || || || | | ||| || || || || || ||| | ||||| || ||
Sbjct 2235 GCGACATTATTAAAAACTCTAAGCATTGGCACAAGTCCATTCGATGTACCATTAGTTCC- 2293
Query 66569 TCGA---TGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624
||| || | | ||| || || || |||||||| | ||| || ||||||||
Sbjct 2294 -CGAAATTGAAGTACCCT-TAGCACGAATGCAATGAACATTTATACCTATTCCACCGGC 2350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397473646304720
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