Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq6120 86.0 1e-11 >seq6120 Length=7451 Score = 86.0 bits (94), Expect = 1e-11 Identities = 196/294 (67%), Gaps = 12/294 (4%) Strand=Plus/Plus Query 196777 GTTGTCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACAT 196836 ||||||||| ||||||||||| || || || |||||| || ||||| || || ||||| Sbjct 4855 GTTGTCTTGCCAGCTGTATCAACGCAGCGCAGATATGGGTCTGGGTGTGCCCTTTAACAT 4914 Query 196837 CGCGTCTTACGCATTGCTGATTCACATGGTGGCGCA----ACAGG--TTAACATGGTACC 196890 ||| || || ||| |||| | ||||| | || || || || |||| ||| Sbjct 4915 CGCCTCGTATGCACTGCTTACGTACATGATAGCTCATGTGACGGGCCTTAA------ACC 4968 Query 196891 GGGCGAGTTCGTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGT 196950 ||| || |||||| || || || | || ||||| || ||||| |||| | Sbjct 4969 GGGAGACTTCGTTCACACGCTTGGCGATGCTCATGTCTACAGTAACCACATAGAACCATT 5028 Query 196951 AGAAGAACAGCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTGGTTATCAAACGCAAACC 197010 | |||||| || | ||| | || | | || |||| || || || || || ||| Sbjct 5029 GAAGGAACAGTTGGCGCGTCACCCACGACCATTCCCGAAACTTGTCATTAAGCGTAAAGT 5088 Query 197011 GGACAGTATCTTCGATTACAAATTCGAAGACTTCGAACTGGTAGGCTACGATCC 197064 ||||| ||| |||| ||||| || ||||| ||| | | || ||| |||| Sbjct 5089 GGACAACATCGAAGATTTTAAATTTGAGGACTTTGAAGTTATTGGTTACAATCC 5142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771354596935560