Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_031927.1
Length=216121
Score E
Sequences producing significant alignments: (Bits) Value
seq6538 100 4e-16
seq9000 87.8 2e-12
>seq6538
Length=3451
Score = 100 bits (110), Expect = 4e-16
Identities = 68/75 (91%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 142793 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAG 142851
||||||||||||||||||| |||||||||||| ||||| |||||| ||||| |||||||
Sbjct 3179 GGGGAATTAGCTCAGTTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAAGGGTTCGAC 3238
Query 142852 TCCGTTATTCTCCAC 142866
||| |||||||||||
Sbjct 3239 TCCCTTATTCTCCAC 3253
>seq9000
Length=5484
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 142793 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAGT 142852
|||| |||||||||| ||| ||||| ||||||||||||||||| ||| ||||||||
Sbjct 2618 GGGGGATTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGATC 2677
Query 142853 CCGTTATTCTCCACCAAC 142870
|||| || ||||||||||
Sbjct 2678 CCGTCATCCTCCACCAAC 2695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 691290890187480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |