Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1570 172 2e-40 seq56 125 2e-26 seq1143 102 3e-19 seq4802 100 9e-19 >seq1570 Length=12249 Score = 172 bits (190), Expect = 2e-40 Identities = 98/100 (98%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 6566 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTT 6507 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||| Sbjct 6506 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 6467 Score = 129 bits (142), Expect = 2e-27 Identities = 73/74 (99%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 10708 AGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 10649 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 10648 GAGGCATTTGGCTA 10635 >seq56 Length=157793 Score = 125 bits (138), Expect = 2e-26 Identities = 72/74 (97%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 12737 AGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGTGCGTCACTAATTAGATGAC 12678 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 12677 GAGGCATTTGGCTA 12664 >seq1143 Length=2146 Score = 102 bits (112), Expect = 3e-19 Identities = 58/59 (98%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 59 GATAGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 1 >seq4802 Length=374 Score = 100 bits (110), Expect = 9e-19 Identities = 57/58 (98%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 58 TAGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635079845504