Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq19045 215 9e-54 seq105658 132 9e-29 >seq19045 Length=223 Score = 215 bits (238), Expect = 9e-54 Identities = 189/228 (83%), Gaps = 7/228 (3%) Strand=Plus/Minus Query 85 AAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA-TTAGCATGGAATAATAGAAT 143 ||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||| Sbjct 222 AAAATTAGAGTGTTCCAAGCAGGCTTCAGCTCGAATACAATTAGCATGGAATAATAGAAT 163 Query 144 AGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGT 203 ||||| | | |||||| ||||||| ||| | ||||||||||||||| | ||| Sbjct 162 AGGACTAGAGA--CTATTTA-TTGGTTTG-AGGCTCTA-GTAATGATTAATAGGAACAGT 108 Query 204 CGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTA 263 |||||| | |||| | || ||||||||||||||||| |||||| || ||||||||||| Sbjct 107 CGGGGGCATTAGTACTTAACAGTCAGAGGTGAAATTCTAGGATTTGTTAAAGACTAACTA 48 Query 264 CTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||||||| || ||||| |||||||||||||||| ||||||||| Sbjct 47 ATGCGAAAGCATTTGCCAAGCATGTTTTCATTAATCA-AGAACGAAAG 1 >seq105658 Length=5670 Score = 132 bits (146), Expect = 9e-29 Identities = 191/261 (73%), Gaps = 9/261 (3%) Strand=Plus/Plus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATA 121 ||| | ||| |||||||||| ||||||||||| | ||||||||| | ||| ||||| Sbjct 1925 GCCGGTACTATTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATA 1984 Query 122 CATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC 179 | |||||| ||||| |||| ||| | | ||||| ||| ||||||| || | Sbjct 1985 TTCTGTGCATGGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCA 2043 Query 180 -GCCGTAATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 | |||||||||||||| ||| ||||| | |||||| | |||||||||| Sbjct 2044 AGAGGTAATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAA 2103 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 |||||||| |||||||||| |||||||| || |||| |||||||||||||| Sbjct 2104 TTCTTGGACCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAA 2163 Query 298 TCAGTGAACGAAAGTTAGGGG 318 ||| ||||||||||||| || Sbjct 2164 TCA-AGAACGAAAGTTAGAGG 2183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914232899008