Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq21010 149 1e-33 seq46800 93.3 9e-17 >seq21010 Length=205 Score = 149 bits (164), Expect = 1e-33 Identities = 149/197 (76%), Gaps = 25/197 (13%) Strand=Plus/Plus Query 191 AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAAC 250 ||||||||||||||||||||||||||| | |||||||||||||||||||||||| || Sbjct 1 AACCTTCCAGCACCGGGCAGGCGTCAGTCCATATACATCGTCTTGCGACTTAGCATGGAC 60 Query 251 CTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG--------------GCCTG 296 |||||||||| |||||||||||||| ||| |||||||| ||| | Sbjct 61 CTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGACCAAAACGCGCTAGCCCG 120 Query 297 ---------TCATAGAC--AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAG 345 ||| || || ||||||||||| ||||||||||| ||||||||||| Sbjct 121 CAAGGGGCTTCACGCACCTCGGTCCCCCTTCTCCCGAAGTTACGGGGGTATTTTGCCGAG 180 Query 346 TTCCTTAACAATAGTTC 362 ||||||||| ||||||| Sbjct 181 TTCCTTAACCATAGTTC 197 >seq46800 Length=447 Score = 93.3 bits (102), Expect = 9e-17 Identities = 88/110 (80%), Gaps = 3/110 (3%) Strand=Plus/Plus Query 250 CCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG--ACAGG 307 |||||||||||| ||||||||||| ||||||| ||| |||||||| | ||| | | || Sbjct 1 CCTGTGTTTTTGATAAACAGTCGCCTGGGCCTCTTCACTGCGGCCAG-CATTGCTGCTGG 59 Query 308 CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAAT 357 | | ||||| || |||||||| | |||||||| ||||||||||| || Sbjct 60 CGTCTCTTCTTCCGAAGTTACGAGACTATTTTGCCTAGTTCCTTAACCAT 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1061277351296