Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq104247 168 1e-39 seq56942 143 5e-32 >seq104247 Length=1430 Score = 168 bits (186), Expect = 1e-39 Identities = 115/128 (90%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 618 GTCATTAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 677 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | ||||||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct 678 -TGCATGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 736 Query 150 ACATCGAA 157 |||||||| Sbjct 737 ACATCGAA 744 Score = 78.8 bits (86), Expect = 2e-12 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246 ||||| |||||||||||||||||||| |||||||||||||| ||||||| | | ||| Sbjct 795 TTGGCCGCCACAAGCCAGTTATCCCTATGGTAACTTTTCTGACACCTCTTG-TTAAAAAC 853 Query 247 TCGAGGGA-CTAAAGGATCGATAGGCC 272 || | | |||||||||||||||| Sbjct 854 TCTTTAAACCAAAAGGATCGATAGGCC 880 >seq56942 Length=419 Score = 143 bits (158), Expect = 5e-32 Identities = 176/243 (72%), Gaps = 23/243 (9%) Strand=Plus/Minus Query 54 TGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGC 113 ||||||| |||||||||||||||||| || |||| || |||||||||| |||| ||||| Sbjct 419 TGTCTCACGACGGTCTAAACCCAGCTTACTTTCCATAATAGTGGGTGATTAATCAAACGC 360 Query 114 TTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACG 173 || || ||||||||| |||||||| |||||||||| ||| Sbjct 359 TTTGCGTGTTCTGCTTC-------------------ACATCGAAAGATCAAAAAGTGACG 319 Query 174 TCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233 || |||| |||||||| | | || |||||||||| ||| |||| ||||||||| ||| | Sbjct 318 TCACTATAAACGCTTGACAGTCATAAGCCAGTTACCCCAGTGGCAACTTTTCTAACACAT 259 Query 234 CTAGCCTCAAA---TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTA 290 || || | ||| || | || ||||| |||||||||| | ||||| || ||| Sbjct 258 CTTGCTTAAAACTCTTAATAAGG-CTAAATGATCGATAGGTCCTGCTTTCGAAGTCCGTA 200 Query 291 TTC 293 ||| Sbjct 199 TTC 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853497146976