Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq982 129 1e-27 >seq982 Length=240 Score = 129 bits (142), Expect = 1e-27 Identities = 173/238 (73%), Gaps = 7/238 (3%) Strand=Plus/Plus Query 70 CCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTT 129 |||||||||||| ||| ||||| | ||| |||||||| || ||| |||| | | ||| Sbjct 2 CCGTGTCTCAGTACCAGTGTGGGGGATCACCCTCTCAGGCCCCCTAAAGATCATTGACTT 61 Query 130 GGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCT---TTCAGCGATA 186 |||| || ||| ||||||||||| |||||| |||| |||||||| | || || Sbjct 62 GGTGAGCCGTTACCTCACCAACTATCTAATCTTGCGCGTGCCCATCTCTATCCACCG--- 118 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246 | ||| | |||||||||||| | | |||||| ||||||| ||| |||| Sbjct 119 GAGTTTTCAATATTTAATGATGCCATCAAAT-ATATTATGGGGTATTAATCTTCCTTTCG 177 Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 ||| | ||| || | ||||||||||||| |||||||| | ||||||| |||| || Sbjct 178 AAAGGCTATCCCCCAGATAAAGGCAGGTTGCACACGTGTTCCGCACCCGTACGCCGCT 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997344980736