Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq7706 170 3e-40 >seq7706 Length=235 Score = 170 bits (188), Expect = 3e-40 Identities = 172/221 (78%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||| | | |||||| | ||||||||||||||||||| Sbjct 221 CCCACGCTTTCGCACCTCAGCGTCAATACCAGTCCAGTGAGCCGCCTTCGCCACTGGTGT 162 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || |||| ||||||||| |||||||| |||||| ||||||||| | ||||||| | | Sbjct 161 TCTTCCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTCACCTCTCCTGGAT 102 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGG-GTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| | |||| | ||| ||| | | ||| ||||||| | | |||||| ||| || Sbjct 101 TCAAGCGATGCAGTCTTAAAGGCA-GTTCTGGAGTTGAGCTCCAGGCTTTCACCTCTAAC 43 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCG 220 || | |||||||| || |||||| |||| ||| |||| Sbjct 42 TTACAAAGCCGCCTACGTGCGCTTTACGCCCAGTAATTCCG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827951567541