Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq22151 201 2e-49 seq22572 154 2e-35 >seq22151 Length=274 Score = 201 bits (222), Expect = 2e-49 Identities = 156/186 (84%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 11 TTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACT 70 |||| ||||||||| |||||| |||||| |||| ||| ||||| | | || || || Sbjct 89 TTCGCACTTAGATGCTTTCAGCGCTTATCTATTCCCAACGTAGCTACTCTGCAATACAGC 148 Query 71 TGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAG 130 |||| | ||| | | ||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 149 TGGCGCCATAACAGATTCACTAGAGGTTTGTCCAACCCGGTCCTCTCGTACTAAGGTCAG 208 Query 131 CTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTG 190 | || |||||| ||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 209 CCCCACTCAAAATTCCTACGCCCACAACAGATAGGGACCGAACTGTCTCGCGACGTTCTG 268 Query 191 AACCCA 196 |||||| Sbjct 269 AACCCA 274 >seq22572 Length=288 Score = 154 bits (170), Expect = 2e-35 Identities = 148/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| | | |||| |||| |||| ||||| |||||| ||||||||| ||||| | ||| Sbjct 99 GAGGCGAGTTTCGCACTTATATGCTTTCAGTGCTTATCTCTTCCAAACGTAGCTACTCAG 158 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| | |||| | ||||||| | |||||||||||||| || |||||||||||||| Sbjct 159 CGGTGCTCCTGGCGGAACAACTGATACACCAGAGGTTTGTTCAATTCGGTCCTCTCGTAC 218 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || || ||||||||| || |||||| | | ||||| |||||||||||||| | Sbjct 219 TAGAATCAAGCCCTCTCAAACATCTAACGCCCGCAATAGATAGAGACCGAACTGTCTCAC 278 Query 182 GACGTTCTGA 191 |||||||||| Sbjct 279 GACGTTCTGA 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780000704556