Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq982 140 1e-30 >seq982 Length=240 Score = 140 bits (154), Expect = 1e-30 Identities = 176/238 (74%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 21 AGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATAC 80 ||||||||| ||||||| | ||| |||| | |||||||| | | ||||| | | Sbjct 237 AGAGCGGCGTACGGGTGCGGAACACGTGTGCAACCTGCCTTTATCTGGGGGATAGCCTTT 178 Query 81 CGAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTC 140 ||||||| | |||||| |||||||| ||| || |||| | || | ||| ||| Sbjct 177 CGAAAGGAAGATTAATACCCCATAATATA-TTTGATGGCATCATTAAATATTGAAAACTC 119 Query 141 CGGCGGTACAG-GATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAA 199 ||| || | || ||| | | |||| |||||| |||||||| ||||||||||| ||||| Sbjct 118 CGGTGG-ATAGAGATGGGCACGCGCAAGATTAGATAGTTGGTGAGGTAACGGCTCACCAA 60 Query 200 GGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGG 257 | | | |||| ||| | ||||||||||||||| ||||| ||| |||||||||||| Sbjct 59 GTCAATGATCTTTAGGGGGCCTGAGAGGGTGATCCCCCACACTGGTACTGAGACACGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1496017471104