Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq7706 246 7e-63 seq24013 95.1 3e-17 >seq7706 Length=235 Score = 246 bits (272), Expect = 7e-63 Identities = 195/234 (83%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 71 CGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTAT 130 |||||||||||||||||||| | |||||| || || ||||| ||||||||||| || Sbjct 2 CGGAATTACTGGGCGTAAAGCGCACGTAGGCGGCTTTGTAAGTTAGAGGTGAAAGCCTGG 61 Query 131 GGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGA 190 ||||||| || | ||||| ||| | |||||| ||| || | |||||| || |||||| Sbjct 62 AGCTCAACTCCAGAACTGCCTTTAAGACTGCATCGCTTGAATCCAGGAGAGGTGAGTGGA 121 Query 191 ATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGC 250 ||||| ||||||| |||||||| |||||||||| ||| |||||||||||||||||||||| Sbjct 122 ATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAAGAACACCAGTGGCGAAGGCGGC 181 Query 251 TTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 | |||||||| | |||| |||||| |||||||||||||||||||||||||| Sbjct 182 TCACTGGACTGGTATTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATT 235 >seq24013 Length=201 Score = 95.1 bits (104), Expect = 3e-17 Identities = 146/204 (72%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 91 GGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCT 150 ||| |||||| || |||||||| |||||||| | || ||||||| || || || Sbjct 201 GGTCCGTAGGCGGCCAAATAAGTCAGTGGTGAAAGCCCATCGCTCAACGATGGAACGGCC 142 Query 151 TTTGAAACTGCAGGGCTAGAGTGCAGGAGGG-GCAAGTGGAATTCCTAGTGTAGCGGTGA 209 |||| |||| |||| || | | ||| | || | |||| |||||||||||||| Sbjct 141 ATTGATACTGTTTGGCTTGAATT-ATTAGGAAGTAACTAGAATATGTAGTGTAGCGGTGA 83 Query 210 AATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTG--TAACTG 267 ||||| |||| |||| |||| |||| | |||||||| | || || |||| | || Sbjct 82 AATGCTTAGAGATTACATGGAATACCAATTGCGAAGGCAGGTTACT--ACTGGTGGATTG 25 Query 268 ACACTGAGGCTCGAAAGCGTGGGG 291 || |||| | ||||||||||||| Sbjct 24 ACGCTGATGGACGAAAGCGTGGGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201928566528