Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq534 116 7e-24 seq19984 86.0 1e-14 >seq534 Length=215 Score = 116 bits (128), Expect = 7e-24 Identities = 146/200 (73%), Gaps = 14/200 (7%) Strand=Plus/Plus Query 31 AGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGA 90 || ||||||||||||||| || |||||||||| ||||||| ||| | || || Sbjct 13 AGCCGATGAAGGACGTAGGAGGCTGCGATAAGCCTCGGGGAGCTGTCAACCGAGCTGAGA 72 Query 91 TCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATTGCATG----------CT 140 |||| ||||||||||||||||||||| || | | ||||| | || || Sbjct 73 TCCGAGGATTTCCGAATGGGGAAACCCAGCAC---GAGTCATGTCGTGTTACCCGCATCT 129 Query 141 GAATACATA-GGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAA 199 ||| ||||| ||| || || ||||| || ||| |||||||||| |||| | |||||| Sbjct 130 GAACACATAGGGTGTGTGGAGGGAACGTGGGGAAGTGAAACATCTCAGTACCCACAGGAA 189 Query 200 AAGAAATCAACCGAGATTCC 219 ||||| |||||| |||||| Sbjct 190 GAGAAAGCAACCGCGATTCC 209 >seq19984 Length=262 Score = 86.0 bits (94), Expect = 1e-14 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 159 AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTC 218 || |||| || |||||||||||||||||||| | |||| |||||| ||| | ||||| Sbjct 256 AGTGAACCCGCTGAACTGAAACATCTAAGTAGGCGGAGGAGAAGAAAACAAAAGTGATTC 197 Query 219 CCAAAGTAGTGGCGAGCGAAATGGGATGAGCC 250 | ||||||||||||||||| |||| |||| Sbjct 196 CGTAAGTAGTGGCGAGCGAACGCGGATTAGCC 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917429517536