Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq105658 374 3e-101 >seq105658 Length=5670 Score = 374 bits (414), Expect = 3e-101 Identities = 376/475 (79%), Gaps = 19/475 (4%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||| | |||| |||||||||| ||||||||||||||||| Sbjct 1519 TATTTTTCGTCACTACCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCC 1460 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1459 TTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTA 1400 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||||| |||||||||| || || |||||||| ||||||||||||||||| ||||| Sbjct 1399 CCCGTTGCAACCATGGTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTG 1340 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCA-- 275 || || | ||| ||| |||| |||| ||| || | ||||| || | || || Sbjct 1339 AAAGATCTGTCGTCGGTACAAGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAAT 1281 Query 276 CCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG--T 332 || || | | || |||| |||| |||||||| ||| | || ||| | Sbjct 1280 ATAACGATCTTGCGATCGC-TTGG-TTTTAGCCTAATAAAAGCACATGTCCCATAAGGTT 1223 Query 333 CGGGGTTT-TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT-- 389 | | ||| | |||||||||||||||||||||||||| |||||||| ||| | || Sbjct 1222 CATGTTTTAATTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTA 1165 Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449 || ||| || ||| ||||||||| ||||||||| || || |||||||| | || | | Sbjct 1164 ACGATCTAAGGAACCATAACTGATATAATGAGCCTTTTGCGGTTTCACT-TTTAATTCGT 1106 Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1105 GTGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 1051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508803945216