Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Platynothrus_20peltifer_20[genbank_20GCA_5F000988905.1_202015-05-06] 105,671 sequences; 100,532,934 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq64116 105 5e-18 >seq64116 Length=3934 Score = 105 bits (116), Expect = 5e-18 Identities = 228/338 (67%), Gaps = 5/338 (1%) Strand=Plus/Plus Query 61472 CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTG 61531 |||| ||||||| ||||| ||| | || || ||| ||||| || | || || |||| Sbjct 2926 CGGCCACATTTGCCGAACGTTTGGTCGCTTTCGCGTCAGTCGAAGGAATTTTCTTTAGTG 2985 Query 61532 GATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCA 61591 | || || || | || || ||| | || || || ||||||||||| || |||| |||| Sbjct 2986 GTTCCTTCGCTTCCATATTCTGGCTTAAAAAGCGCGGACTTATGCCTGGATTGACGTTCA 3045 Query 61592 GCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC-TGTTTTGCTATTC 61650 | ||||| | || || ||||| || || | ||||| ||||| || ||| || |||||| Sbjct 3046 GTAATGAACTTATTTCTCGCGATGAAGGACTTCATTGCGATTTCGCGTGTCTT-CTATTC 3104 Query 61651 AAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCG 61710 | || | | | ||| || | |||||| || | || || || ||| Sbjct 3105 AGAC---ACATTGAGAACAAACCATATGAGGAGAAAGTTTTGCAAATAGTGAAAGAAGCG 3161 Query 61711 GTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAAT 61770 || ||| |||||||| ||||| || || || ||||| || || || ||||||||| Sbjct 3162 GTTGTTATTGAACAGGAGTTTCTAACGGAAGCATTGCCTGTGAATCTGATTGGCATGAAT 3221 Query 61771 TGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGA 61808 || | || ||| | || || |||| || ||||| Sbjct 3222 TGCGATCTCATGAAGACATACATCGAATACGTGGCCGA 3259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397055985963440