Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5256 179 7e-43 >seq5256 Length=3554119 Score = 179 bits (198), Expect = 7e-43 Identities = 216/289 (75%), Gaps = 11/289 (4%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||||| || |||| || | ||| | |||||||||||| ||||||||||| | Sbjct 3544451 ATGCTCTTCAGTGAGTGTCGAGGTGGGCCGACAATTTTACTTTGAACAAATTAGAGTGCT 3544510 Query 99 CAAAGCAGGCCTT------TGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTG 151 |||||| ||| |||| ||||| | |||||||||||||||||| || | Sbjct 3544511 CAAAGCGGGCTCAAAATGCTGCTTGAATATTTCGTGCATGGAATAATAGAATATGATCT- 3544569 Query 152 CGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCGTAATGATTAATAGGGATAGTCGGGGG 209 |||||||||||||||||||| || || || ||||||||||||||||||| ||||| Sbjct 3544570 CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGGTAATGATTAATAGGGATAACTGGGGG 3544629 Query 210 TGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGA 269 | ||||| || ||||||||||||||||||| ||||| ||| | |||| Sbjct 3544630 CATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACATCAGCGA 3544689 Query 270 AAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||| || |||| | ||||||||| ||||| ||||||||||||| || Sbjct 3544690 AAGCATTTGCCAAAGGTGTTTTCATCAATCA-AGAACGAAAGTTAGAGG 3544737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915129136064