Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq5256 351 2e-94 seq696 295 1e-77 >seq5256 Length=3554119 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 3553433 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 3553374 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 3553373 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 3553314 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3553313 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 3553254 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 3553253 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 3553195 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 3553194 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 3553154 >seq696 Length=1294 Score = 295 bits (326), Expect = 1e-77 Identities = 193/210 (92%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT- 89 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1069 TCATCAGTAGGATAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTG 1128 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA-TGATAGGAAGAGCC 148 |||| ||||||||||||| || ||| || |||||| || | |||||||||||||| Sbjct 1129 ATTAACGGGTGAACAATCCGACACTTTGGGACTTCTGCGTCCTCAATGATAGGAAGAGCC 1188 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1189 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 1248 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||||||||||||||||| Sbjct 1249 CCCTGTGGTAACTTTTCTGGCACCTCTAGC 1278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854333843808