Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5256 228 2e-57 >seq5256 Length=3554119 Score = 228 bits (252), Expect = 2e-57 Identities = 208/258 (81%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 3545160 CTTCTTAGAGGGACCGGCGGCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 3545217 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| || || | |||| Sbjct 3545218 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCT--- 3545274 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || ||||| ||| | ||| || | | |||||| ||||||||||||| | | ||| Sbjct 3545275 CCCTGGCCTAGAGGCCCGGGCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 3545334 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||| | | | |||||||||| ||||||||||||| ||||| ||| |||||||||| Sbjct 3545335 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 3545394 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 3545395 ACGTCCCTGCCCTTTGTA 3545412 Score = 228 bits (252), Expect = 2e-57 Identities = 208/258 (81%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 3545769 CTTCTTAGAGGGACCGGCGGCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 3545826 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| || || | |||| Sbjct 3545827 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCT--- 3545883 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || ||||| ||| | ||| || | | |||||| ||||||||||||| | | ||| Sbjct 3545884 CCCTGGCCTAGAGGCCCGGGCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 3545943 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||| | | | |||||||||| ||||||||||||| ||||| ||| |||||||||| Sbjct 3545944 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 3546003 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 3546004 ACGTCCCTGCCCTTTGTA 3546021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947126658304