Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq638 140 1e-30 seq92 84.2 9e-14 >seq638 Length=122109 Score = 140 bits (154), Expect = 1e-30 Identities = 109/130 (84%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || | |||||||||||||||||||||||||||||| ||| ||||| ||| Sbjct 119835 AGAGCGTACACGCTGGGACCCGAAAGATGGTGAACTATGCCTGGCCAGGATGAAGTCAGG 119776 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| ||||||| ||||| ||||||||||||||||| | ||||| Sbjct 119775 GGAAACCCTGATGGAGGTCCGCAGCGATTCTGACGTGCAAATCGATCGTCTGAGCTGGGT 119716 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 119715 ATAGGGGCGA 119706 Score = 127 bits (140), Expect = 9e-27 Identities = 116/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| || |||||| | | ||||| ||||||| Sbjct 120655 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGCTGGTGGTAAACTCCATCTAAGGCTAAAT 120596 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 120595 AT-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 120537 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 120536 GAGAGAGTTCAAGAGTACGTGAAA 120513 >seq92 Length=1037607 Score = 84.2 bits (92), Expect = 9e-14 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 |||| ||| |||||| ||| |||||| || |||| ||||| ||||||||||||||||| Sbjct 964227 GAAGTCAGGGGAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCG 964168 Query 665 AATTTGGGTATAGGGGCGA 683 | ||||||||||||||| Sbjct 964167 GAACTGGGTATAGGGGCGA 964149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079961518700