Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq181 214 3e-53 seq92 178 2e-42 >seq181 Length=653437 Score = 214 bits (236), Expect = 3e-53 Identities = 215/282 (76%), Gaps = 37/282 (13%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 535972 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 535913 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------- 115 | |||| || | |||| |||||| |||||||||||||| Sbjct 535912 C-TCAATCT-CGTGCGGCTCGAAGCCGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGC 535855 Query 116 ---------------CC--AGCCACCAAC-CATAGTCGATGGGGC-TATTTAGCAGGTTA 156 || |||||| || | || || | || ||||||||||| || Sbjct 535854 CAGTGAGTTGCGCGACCGAAGCCACGCACACCTAAATGACGACGCCTATTTAGCAGGCTA 535795 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 535794 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 535735 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||||||||||| | |||||||| Sbjct 535734 GCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 535693 >seq92 Length=1037607 Score = 178 bits (196), Expect = 2e-42 Identities = 187/247 (76%), Gaps = 33/247 (13%) Strand=Plus/Plus Query 43 CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAG 102 |||||||||||||||||||||||||||||| |||| || | |||| |||||| | | Sbjct 957878 CATCTAAGGGCATCACAGACCTGTTATTGC-TCAATCT-CGTGCGGCTCGAAGCCGACGG 957935 Query 103 TCCCTCTAAGAAG---------------CCAGCCAC-----CAACCATAGTCG------- 135 ||||||||||||| ||||| | | ||| |||| Sbjct 957936 TCCCTCTAAGAAGAATTTTAATACGTCGCCAGCGAGTTGCGCGACCGAAGTCACACCTAA 957995 Query 136 ATGGGG----CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 ||| | |||||||||||| || ||||||||||||| |||||||||||||||||| Sbjct 957996 ATGACGACGCCTATTTAGCAGGCTAGAGTCTCGTTCGTTACTGGAATTAACCAGACAAAT 958055 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | |||||||||||||||||||||||||||||||||||| |||||||||||||||| | | Sbjct 958056 CGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTGTTA 958115 Query 252 ATCTGTC 258 ||||||| Sbjct 958116 ATCTGTC 958122 Score = 161 bits (178), Expect = 2e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| || ||||||||||||| ||||||||||||||| ||| |||||||| Sbjct 963220 CTATTTAGCAGGCTAGAGTCTCGTTCGTTACTGGAATTAACCAGACATATCGCTCCACCA 963279 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 963280 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 963336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796786152114