Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= AAMG01001161.1 Length=375 Score E Sequences producing significant alignments: (Bits) Value seq961 105 1e-20 >seq961 Length=33037 Score = 105 bits (116), Expect = 1e-20 Identities = 267/388 (69%), Gaps = 56/388 (14%) Strand=Plus/Plus Query 1 GCGACGTAGAATGTTCGTTTCGGCAGGTCTTTCGCCAGCCGGAATCTTCGCTTGTAGCTT 60 |||||||||| ||| |||| |||||||||||| ||| ||||||||||| ||| |||||| Sbjct 23880 GCGACGTAGA-TGT-CGTT-CGGCAGGTCTTT-GCCCGCCGGAATCTT-GCT-GTAGCT- 23932 Query 61 CATTCGGGCGTTGCCCCCGTTAATTCGGCCAAGAAACTTCGGCCGGATTGGCCTAAAAGT 120 |||| |||| ||||||||| || | |||| |||||| Sbjct 23933 CATT-GGGCAGTGCCCCCGTG--TTTGACCAA----------------------AAAAGT 23967 Query 121 TGGCGGCGATTATAGGCACATTCTGGCGCCG-ATGCCATTGC--GCCAGAACGTCGTACG 177 |||| ||||||||||||||||||| || | |||||| | ||| || || || Sbjct 23968 -GGCGACGATTATAGGCACATTCTGCCGGGGCATGCCACGCCTGGCCTGATGTGCGGCCG 24026 Query 178 -GTCATTCGT--CTTT-GCGGCTGATAACGCGGGTCGCT-GGCTTGCAGTTGGTGCAGGC 232 |||| ||| |||| |||| | |||| ||| ||| || || || |||||| Sbjct 24027 CGTCAGGCGTGGCTTTCGCGGTAGT-----CGGGGTGCTCGGCCTGAAGCCGGCGCAGGC 24081 Query 233 GGGCCAGGGTGTCCTGGCGATAAAA--GCGGCTGAGTTGGGCGTACACCTGTGGATAAC- 289 | ||||| | ||| || || || || ||| | | || || ||| |||||| Sbjct 24082 GCGCCAGCGGGTCTTGCCGGTAGAACAGCGCC--AACTGCTGATAGACCAATGGATAGGC 24139 Query 290 --GATTGACCAGTAAATCCGGGGCGCTGAAAAAGTATTCGCTGGTGACGGCAAAGAACTC 347 ||| || ||| || ||||| || || ||||||||||||||||||||||| ||||| Sbjct 24140 CTGATGGAGCAGG---TCGGGGGCACTAAAGAAGTATTCGCTGGTGACGGCAAAAAACTC 24196 Query 348 CGCCGGGTTTTCGGCGGCGTAGGGGTCG 375 || ||||| || || || ||||||||| Sbjct 24197 GGCGGGGTTCTCTGCCGCATAGGGGTCG 24224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1097580309056