Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq885 114 2e-23 >seq885 Length=40661 Score = 114 bits (126), Expect = 2e-23 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 ||| || || || |||||||| | ||||||||||||||||| |||| ||||| || || Sbjct 15970 GCCTGGCGCTGGTGCTTCTTCGACCACCTTCTGGTGACGACGCTGCATGGAGCAGTCACG 16029 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 || |||| | ||| |||| ||||| ||||| | ||| || || | ||| | ||| || Sbjct 16030 TTCAGCCAGATAGATCGCGTTACCCTGACCGTCAGCCAGCACCTGAATTTCGATGTGGCG 16089 Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209 |||||| |||||| ||||||| ||| ||||| Sbjct 16090 TGGGTTTTCCAGGTATTTTTCCATGTACACCAT 16122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735987208780