Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq181 102 8e-20 seq92 93.3 4e-17 seq104 89.7 5e-16 >seq181 Length=653437 Score = 102 bits (112), Expect = 8e-20 Identities = 136/185 (74%), Gaps = 13/185 (7%) Strand=Plus/Plus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACATTA 65 |||||||||||| ||||||||| | ||||||| ||| |||| |||| ||| Sbjct 535196 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCTGCTTGAAT--ATTT 535253 Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCC 121 | ||||||||||||||||| || | |||||||||||||| ||||| || || | Sbjct 535254 CGTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGA 535312 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||||| ||||| | ||||| || | |||||||||||| Sbjct 535313 GGTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 535372 Query 182 TGGAT 186 ||||| Sbjct 535373 TGGAT 535377 >seq92 Length=1037607 Score = 93.3 bits (102), Expect = 4e-17 Identities = 134/185 (72%), Gaps = 13/185 (7%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTT------TGCTCGAATACATTA 65 |||||||||||| |||||||| | ||||||| ||| |||| ||||| || Sbjct 963824 TTTTACTTTGAACTAATTAGAGTGCTCAAAGCGGGCTCAAAATGCTGCTTGAATA--TTT 963767 Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 | |||||||||||| |||| || | |||||||||||||| ||||| || || | Sbjct 963766 CGTGCATGGAATAATAAAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGA 963708 Query 123 G-TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 | ||||||| |||| ||||| ||||| | ||||| || | |||||||||||| Sbjct 963707 GGTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 963648 Query 182 TGGAT 186 ||||| Sbjct 963647 TGGAT 963643 >seq104 Length=942557 Score = 89.7 bits (98), Expect = 5e-16 Identities = 133/185 (72%), Gaps = 13/185 (7%) Strand=Plus/Plus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACATTA 65 |||||| ||||||||||||||| | ||||||| ||| |||| |||| ||| Sbjct 627965 TTTTACCTTGAAAAAATTAGAGTGCTCAAAGCGGGCTCAAAGTGCTGCTTGAAT--ATTT 628022 Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCC 121 | ||||||||||||||||| || | ||||||| |||||| |||| || || | Sbjct 628023 CGTGCATGGAATAATAGAATATGATCT-CGGTTCTGTTTTGTTAGTTTTCAGAACTCCGA 628081 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||| | ||||| | ||||| || | |||||||||||| Sbjct 628082 GGTAATGATTAATAGGGACAACTGGGGGCTTTCGTATTGCGACGTTATAGGTGAAATTCT 628141 Query 182 TGGAT 186 ||||| Sbjct 628142 TGGAT 628146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511991101760