Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq1177 118 4e-24 >seq1177 Length=16696 Score = 118 bits (130), Expect = 4e-24 Identities = 179/255 (70%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 120 CCGTTCCTGTACCTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGC 179 || ||||||| | ||| || |||||| || |||||| |||| || ||||| ||||| Sbjct 13474 CCTTTCCTGTGGTTTGCGCTGCTGATGGGGCCATCCGGGCTGATTGCCATTCTGGCCGGG 13415 Query 180 TGGTTCACCACGGAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCG 239 ||| ||||||| ||| | ||||| ||||||||||||||||| || || ||||||| | Sbjct 13414 TGGATCACCACCGAAGTGGGCCGCCAGCCGTGGGTGGTCTATGGGCTCCAGCGCACGAAG 13355 Query 240 GATGCGTCCTCCGGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTG 299 |||||| || | ||| || |||| |||| | | ||| || ||| | || Sbjct 13354 GATGCGGTTTCTGCCCATGGCGATTTGCATATGAGCGTGAGCCTGCTGGCCTTCTTCGTC 13295 Query 300 GTGTACTTCGCGCTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGT 359 || ||| | || | || || | ||| |||| ||| ||||||| | || ||||| Sbjct 13294 GTTTACACCTCGGTATTTGGCGTGGGTTACAGCTATATGGTGCGCCTCATCCGAAAAGGC 13235 Query 360 CCGCAGACCCACGAA 374 |||||| | || ||| Sbjct 13234 CCGCAGCCGCATGAA 13220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1724769057088