Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= AAMG01002051.1 Length=353 Score E Sequences producing significant alignments: (Bits) Value seq1025 318 1e-84 >seq1025 Length=27778 Score = 318 bits (352), Expect = 1e-84 Identities = 287/356 (81%), Gaps = 6/356 (2%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||||||| ||||||||||||| ||||| ||||| ||||||||| ||||| |||||||| Sbjct 545 CGACCGCTTGCGCCATGTGGCCGAGCGTGCCGAACTGGGTGAAAAGCGCGAGGCGATCAT 486 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGG-CAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCA 119 |||||| |||||||| || | |||||| ||||||||||||||||||| |||| | |||| Sbjct 485 CGCCGTTACCATTCCTGA-ACGCCCGGGCAGCTTCAAGGCGTTCTGCCAGGCGATTGGCA 427 Query 120 AGCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTG 179 | |||||||||||||| ||||||||||| ||| || ||||||||| ||||| | Sbjct 426 AACGCCAGATCACCGAGTTCAACTACCGCAAGCACACCTCGGACGAGGCGCATATCTTCG 367 Query 180 TCGGCGTGCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAGC--CTGAC 237 | ||||||||||||||||| || | |||||| ||| || || | |||| || Sbjct 366 TGGGCGTGCAGACCCACCCGGAAAACGACCCGCGCGCAGCCTTGGT--GCAGCATTTGGG 309 Query 238 CGAGCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATCCG 297 ||||||||| |||||||| |||||||||||| || |||||||||||| ||||||| || Sbjct 308 CGAGCAGGGCTTCCCGGTAACGGACCTGACCGACAACGAGCTGGCCAAGTTGCACATTCG 249 Query 298 CCATATGGTCGGCGGCCATGCGGCGCACGTCAGCAATGAAGTGGTGTTCCGCTTCG 353 ||||||||||||||||| |||| || |||| ||||| ||||| | ||||||| Sbjct 248 TCATATGGTCGGCGGCCACTCGGCTGGCGCCAGCGATGAAATGGTGCTGCGCTTCG 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027181572032