Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq236 122 1e-25 >seq236 Length=545527 Score = 122 bits (134), Expect = 1e-25 Identities = 154/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 82 CCAACCTGA-GCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTT 140 ||||| ||| | | |||||||| ||||| | | || | || ||||| || || |||| Sbjct 39824 CCAACATGAAGGATGGCAAGGAATGCTTCCT-GCGGCAGCTCGACGTTACCGACCTGCTT 39766 Query 141 CATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACC 200 ||| || || ||||| | || ||||||| |||||||| ||||||||| |||||||| Sbjct 39765 CATACGCTTCTTACCTTCTTTCTGCTTCTGCAGCAGCTTTTTCTTACGGCTGACGTCACC 39706 Query 201 GCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGAT 260 ||| ||||| || ||||| ||||| || | || || |||| | ||||| || || Sbjct 39705 GCCATAGCACTTCGCCAGAACGTTTTTACGCAGCTGTTTCACGGTAGAACGCGCGATAAT 39646 Query 261 CTGCCCGCCAATGGCGGCCTGGATCGCGA 289 || ||||||||| ||||| ||||||| Sbjct 39645 GTGGTTGCCAATGGCCGCCTGAATCGCGA 39617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838384959104