Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq181 228 2e-57 seq92 77.0 6e-12 >seq181 Length=653437 Score = 228 bits (252), Expect = 2e-57 Identities = 208/258 (81%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 535871 CTTCTTAGAGGGACCGGCGGCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 535928 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| || || | |||| Sbjct 535929 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCT--- 535985 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || ||||| ||| | ||| || | | |||||| ||||||||||||| | | ||| Sbjct 535986 CCCTGGCCTAGAGGCCCGGGCAACCCGCTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 536045 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||| | | | |||||||||| ||||||||||||| ||||| ||| |||||||||| Sbjct 536046 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 536105 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 536106 ACGTCCCTGCCCTTTGTA 536123 >seq92 Length=1037607 Score = 77.0 bits (84), Expect = 6e-12 Identities = 63/73 (86%), Gaps = 3/73 (4%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| |||||| | ||||| || | ||||| |||||||||||||||| Sbjct 957948 CTTCTTAGAGGGACCGTCGGCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 957891 Query 131 ATGCCCTTAGATG 143 ||||||||||||| Sbjct 957890 ATGCCCTTAGATG 957878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947183007232