Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq638 300 5e-79 >seq638 Length=122109 Score = 300 bits (332), Expect = 5e-79 Identities = 169/171 (99%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83630 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 83689 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 83690 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAAT 83749 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 83750 TTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 83800 Score = 168 bits (186), Expect = 2e-39 Identities = 163/213 (77%), Gaps = 25/213 (12%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---------CCGAAAC- 234 || ||||||| ||||||| | ||||||||||||||| || ||||| | Sbjct 117515 GAGTAAGTAAGGAAACGATGAAAGTAGTGGTATTTCACAGTCGAACAGCAAACCGAAGCC 117574 Query 235 ----GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA 290 | |||||||||||||||||||||||| ||| | ||| | | |||||||||||| Sbjct 117575 CACTGTCTCCCACTTATTCTACACCTCTCATGTCTCCTTACAGTGCCAGACTAGAGTCAA 117634 Query 291 GCTCAACAGGGTCTTCTT-----------TCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 |||||||||||||||||| |||||||| ||| |||||||||||||||| Sbjct 117635 GCTCAACAGGGTCTTCTTTGGCCGCTGAGTCCCCGCTAATTTTTCCAAGCCCGTTCCCTT 117694 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 372 ||| ||||||||||||||||||||||||||||| Sbjct 117695 GGCAGTGGTTTCGCTAGATAGTAGATAGGGACA 117727 Score = 109 bits (120), Expect = 2e-21 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 117165 CTTTTGCTCTACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATC 117224 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGA 124 ||| |||||||| ||||||||| |||||||||| |||| | |||| || | |||| Sbjct 117225 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCTGTGTCCTCGAATCGGA 117282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635170664512