Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_009552.2
Length=40863
Score E
Sequences producing significant alignments: (Bits) Value
seq754 284 3e-72
>seq754
Length=71200
Score = 284 bits (314), Expect = 3e-72
Identities = 543/795 (68%), Gaps = 14/795 (2%)
Strand=Plus/Plus
Query 37652 ATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGC--GTCGAAAAAGAAG 37709
|||||||| ||| | || ||| || || | | | || | ||| | ||||||| |
Sbjct 66016 ATGAAACAGTATCTTGAATTGATGAAAAAAGTGCTCGATGAGGGCACGCCGAAAAAC--G 66073
Query 37710 ACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAG 37769
|||| || ||| ||| ||||| || | || |||| |||| | |||||||| ||||| |
Sbjct 66074 ACCGTACCGGCACCGGTACGCTCTCCATTTTTGGCCACCAGATGCGCTTCAATTTACAGG 66133
Query 37770 ATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGC 37829
| || || || || ||||| || || | ||| | ||||| |||||| |||||||||
Sbjct 66134 AAGGCTTCCCTCTGGTGACGACTAAGCGCTGCCATCTGCGCTCGATCATTCATGAACTGC 66193
Query 37830 TTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTT 37889
| ||||| | |||||||||| ||||| ||| |||| || || ||| | || |
Sbjct 66194 TCTGGTTCCTGCAAGGCGATACCAACGTTGCGTATCTGCACGAAAACAACGTCTCCATCT 66253
Query 37890 GGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCT 37949
|||| || ||||| || ||||||||| | || |||||| |||||||| ||| ||||||
Sbjct 66254 GGGACGAATGGGCAGATGAAAACGGCAACCTGGGCCCGGTTTACGGCAAGCAGTGGCGCG 66313
Query 37950 CGTGG--AAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGAT 38007
| ||| || | | || || || ||||||||| | || | | || |
Sbjct 66314 CATGGCCAACGC--CTGATGGCCGCCATATTGACCAGATCACCACCGTGATGAACCAGCT 66371
Query 38008 CAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGA 38067
||| |||| | || ||||| | | || ||| ||||| || | || ||||
Sbjct 66372 GAAAAACGATCCAGACTCGCGCCGAATCATTGTTTCCGCCTGGAACGTCGGCGAGCTGGA 66431
Query 38068 CGAGATGAAGCTGCCGCCGTGTCATTACGC---CTTTCAGTTCTATGTCGCCAACGGCCG 38124
| | ||| |||| | ||||| || ||| ||| |||||||| ||||| ||||
Sbjct 66432 CAAAATGGCGCTGGCACCGTGCCA---CGCGTTCTTCCAGTTCTACGTCGCTGACGGAAA 66488
Query 38125 GTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184
| | || ||| | | ||||| ||| |||| ||| | || |||||||||||||
Sbjct 66489 GCTCTCCTGCCAGCTCTACCAGCGTTCCTGTGATGTGTTCCTCGGCCTGCCGTTTAACAT 66548
Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGA 38244
|| ||||| |||||||| |||||| | || || || || ||| |||| || || ||
Sbjct 66549 TGCCAGCTATGCGCTGTTAGTCCATATGATGGCGCAGCAGTGTGACCTGGAAGTGGGGGA 66608
Query 38245 ACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACT 38304
| | | ||||| || ||| |||| | |||| || ||| |||| || | | ||
Sbjct 66609 TTTTGTCTGGACCGGTGGGGACACCCATCTCTACAGCAACCATATGGAGCAGACCCATCT 66668
Query 38305 GCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTC 38364
|||||||| ||||| |||||| ||||||||||||| | | || || || ||| ||||
Sbjct 66669 CCAGCTGACCCGCGAACCGCGCGCGCTGCCGAAGCTCATCATCAAGCGCAAACCGGCGTC 66728
Query 38365 TATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGAT 38424
||||||||||| | ||| || ||||| || | |||||||| ||||| || | ||
Sbjct 66729 AATCTTTGACTACCGCTTCGATGATTTTGAGATTGAGGGCTACGACCCGCACCCTGGCAT 66788
Query 38425 TAAAGCACCGGTGGC 38439
||||| || || ||
Sbjct 66789 CAAAGCGCCCGTCGC 66803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130637216878100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |