Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq754 284 3e-72 >seq754 Length=71200 Score = 284 bits (314), Expect = 3e-72 Identities = 543/795 (68%), Gaps = 14/795 (2%) Strand=Plus/Plus Query 37652 ATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGC--GTCGAAAAAGAAG 37709 |||||||| ||| | || ||| || || | | | || | ||| | ||||||| | Sbjct 66016 ATGAAACAGTATCTTGAATTGATGAAAAAAGTGCTCGATGAGGGCACGCCGAAAAAC--G 66073 Query 37710 ACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAG 37769 |||| || ||| ||| ||||| || | || |||| |||| | |||||||| ||||| | Sbjct 66074 ACCGTACCGGCACCGGTACGCTCTCCATTTTTGGCCACCAGATGCGCTTCAATTTACAGG 66133 Query 37770 ATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGC 37829 | || || || || ||||| || || | ||| | ||||| |||||| ||||||||| Sbjct 66134 AAGGCTTCCCTCTGGTGACGACTAAGCGCTGCCATCTGCGCTCGATCATTCATGAACTGC 66193 Query 37830 TTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTT 37889 | ||||| | |||||||||| ||||| ||| |||| || || ||| | || | Sbjct 66194 TCTGGTTCCTGCAAGGCGATACCAACGTTGCGTATCTGCACGAAAACAACGTCTCCATCT 66253 Query 37890 GGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCT 37949 |||| || ||||| || ||||||||| | || |||||| |||||||| ||| |||||| Sbjct 66254 GGGACGAATGGGCAGATGAAAACGGCAACCTGGGCCCGGTTTACGGCAAGCAGTGGCGCG 66313 Query 37950 CGTGG--AAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGAT 38007 | ||| || | | || || || ||||||||| | || | | || | Sbjct 66314 CATGGCCAACGC--CTGATGGCCGCCATATTGACCAGATCACCACCGTGATGAACCAGCT 66371 Query 38008 CAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGA 38067 ||| |||| | || ||||| | | || ||| ||||| || | || |||| Sbjct 66372 GAAAAACGATCCAGACTCGCGCCGAATCATTGTTTCCGCCTGGAACGTCGGCGAGCTGGA 66431 Query 38068 CGAGATGAAGCTGCCGCCGTGTCATTACGC---CTTTCAGTTCTATGTCGCCAACGGCCG 38124 | | ||| |||| | ||||| || ||| ||| |||||||| ||||| |||| Sbjct 66432 CAAAATGGCGCTGGCACCGTGCCA---CGCGTTCTTCCAGTTCTACGTCGCTGACGGAAA 66488 Query 38125 GTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184 | | || ||| | | ||||| ||| |||| ||| | || ||||||||||||| Sbjct 66489 GCTCTCCTGCCAGCTCTACCAGCGTTCCTGTGATGTGTTCCTCGGCCTGCCGTTTAACAT 66548 Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGA 38244 || ||||| |||||||| |||||| | || || || || ||| |||| || || || Sbjct 66549 TGCCAGCTATGCGCTGTTAGTCCATATGATGGCGCAGCAGTGTGACCTGGAAGTGGGGGA 66608 Query 38245 ACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACT 38304 | | | ||||| || ||| |||| | |||| || ||| |||| || | | || Sbjct 66609 TTTTGTCTGGACCGGTGGGGACACCCATCTCTACAGCAACCATATGGAGCAGACCCATCT 66668 Query 38305 GCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTC 38364 |||||||| ||||| |||||| ||||||||||||| | | || || || ||| |||| Sbjct 66669 CCAGCTGACCCGCGAACCGCGCGCGCTGCCGAAGCTCATCATCAAGCGCAAACCGGCGTC 66728 Query 38365 TATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGAT 38424 ||||||||||| | ||| || ||||| || | |||||||| ||||| || | || Sbjct 66729 AATCTTTGACTACCGCTTCGATGATTTTGAGATTGAGGGCTACGACCCGCACCCTGGCAT 66788 Query 38425 TAAAGCACCGGTGGC 38439 ||||| || || || Sbjct 66789 CAAAGCGCCCGTCGC 66803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130637216878100