Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq754 174 2e-38 seq949 87.8 3e-12 >seq754 Length=71200 Score = 174 bits (192), Expect = 2e-38 Identities = 186/246 (76%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 196124 GACCGTACCGGCACAGGCACTACGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGCAA 196183 |||||||||||||| || || ||| | | ||| |||||||||||| || | || Sbjct 66073 GACCGTACCGGCACCGGTACGCTCTCCATTTTTGGCCACCAGATGCGCTTCAATTTACAG 66132 Query 196184 GACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACTG 196243 || || ||||| ||||| || || ||| ||||||||| || ||||||||||||||| Sbjct 66133 GAAGGCTTCCCTCTGGTGACGACTAAGCGCTGCCATCTGCGCTCGATCATTCATGAACTG 66192 Query 196244 CTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTATC 196303 || |||||||| | || || |||||| | ||| ||| | || ||| ||||| ||| Sbjct 66193 CTCTGGTTCCTGCAAGGCGATACCAACGTTGCGTATCTGCACGAAAACAACGTCTCCATC 66252 Query 196304 TGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGGCGT 196363 ||| |||| ||||| | ||| ||| |||||||| ||||||||||| ||||||||||| Sbjct 66253 TGGGACGAATGGGCAGATGAAAACGGCAACCTGGGCCCGGTTTACGGCAAGCAGTGGCGC 66312 Query 196364 GAATGG 196369 | |||| Sbjct 66313 GCATGG 66318 Score = 105 bits (116), Expect = 1e-17 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 196501 TGACCAGATTTCTAAAGTTCTTGACCAGCTGCGCAACGATCCTGATAACCGCCGTATCAT 196560 ||||||||| | | || | |||||||| |||||||| || ||||| ||||| Sbjct 66342 TGACCAGATCACCACCGTGATGAACCAGCTGAAAAACGATCCAGACTCGCGCCGAATCAT 66401 Query 196561 TGTATCGGCCTGGAACGTCGGCGAGCTAGACGATATGGCGTTAGCTCCATGCCATGCTTT 196620 ||| || |||||||||||||||||||| ||| | |||||| | || || ||||| || || Sbjct 66402 TGTTTCCGCCTGGAACGTCGGCGAGCTGGACAAAATGGCGCTGGCACCGTGCCACGCGTT 66461 Query 196621 CTTCCAGTTTTAC 196633 ||||||||| ||| Sbjct 66462 CTTCCAGTTCTAC 66474 >seq949 Length=34148 Score = 87.8 bits (96), Expect = 3e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856 ||||||||| ||||||||||| ||||||||||||| | |||||||||||||| |||||| Sbjct 28201 GTAGTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGT 28142 Query 3857 CAGTCCTGCCA 3867 | || | |||| Sbjct 28141 CCGTTCCGCCA 28131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771525098161680