Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031120.1
Length=241147
Score E
Sequences producing significant alignments: (Bits) Value
seq754 174 2e-38
seq949 87.8 3e-12
>seq754
Length=71200
Score = 174 bits (192), Expect = 2e-38
Identities = 186/246 (76%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 196124 GACCGTACCGGCACAGGCACTACGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGCAA 196183
|||||||||||||| || || ||| | | ||| |||||||||||| || | ||
Sbjct 66073 GACCGTACCGGCACCGGTACGCTCTCCATTTTTGGCCACCAGATGCGCTTCAATTTACAG 66132
Query 196184 GACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACTG 196243
|| || ||||| ||||| || || ||| ||||||||| || |||||||||||||||
Sbjct 66133 GAAGGCTTCCCTCTGGTGACGACTAAGCGCTGCCATCTGCGCTCGATCATTCATGAACTG 66192
Query 196244 CTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTATC 196303
|| |||||||| | || || |||||| | ||| ||| | || ||| ||||| |||
Sbjct 66193 CTCTGGTTCCTGCAAGGCGATACCAACGTTGCGTATCTGCACGAAAACAACGTCTCCATC 66252
Query 196304 TGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGGCGT 196363
||| |||| ||||| | ||| ||| |||||||| ||||||||||| |||||||||||
Sbjct 66253 TGGGACGAATGGGCAGATGAAAACGGCAACCTGGGCCCGGTTTACGGCAAGCAGTGGCGC 66312
Query 196364 GAATGG 196369
| ||||
Sbjct 66313 GCATGG 66318
Score = 105 bits (116), Expect = 1e-17
Identities = 103/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 196501 TGACCAGATTTCTAAAGTTCTTGACCAGCTGCGCAACGATCCTGATAACCGCCGTATCAT 196560
||||||||| | | || | |||||||| |||||||| || ||||| |||||
Sbjct 66342 TGACCAGATCACCACCGTGATGAACCAGCTGAAAAACGATCCAGACTCGCGCCGAATCAT 66401
Query 196561 TGTATCGGCCTGGAACGTCGGCGAGCTAGACGATATGGCGTTAGCTCCATGCCATGCTTT 196620
||| || |||||||||||||||||||| ||| | |||||| | || || ||||| || ||
Sbjct 66402 TGTTTCCGCCTGGAACGTCGGCGAGCTGGACAAAATGGCGCTGGCACCGTGCCACGCGTT 66461
Query 196621 CTTCCAGTTTTAC 196633
||||||||| |||
Sbjct 66462 CTTCCAGTTCTAC 66474
>seq949
Length=34148
Score = 87.8 bits (96), Expect = 3e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
||||||||| ||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 28201 GTAGTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGT 28142
Query 3857 CAGTCCTGCCA 3867
| || | ||||
Sbjct 28141 CCGTTCCGCCA 28131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 771525098161680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |