Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq813 214 5e-51 >seq813 Length=55966 Score = 214 bits (236), Expect = 5e-51 Identities = 225/296 (76%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 33619 ACAATTTCTGTGGTGTATTTTTCAACTCCAGCATTATCAGTCCATTTTCTAGTGCGCAAC 33678 |||| ||| |||||||| || ||| | || | | ||| |||||||| | ||||||| Sbjct 13476 ACAACTTCGGTGGTGTACTTCTCAGCGCCGGACTGATCGGTCCATTTACGGGTGCGCAGT 13535 Query 33679 TGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGC 33738 || ||||| | ||| || || || ||||| | ||||||||||| |||| ||| || || Sbjct 13536 TGGCCTTCGATATAGACCTGAGAACCTTTACGCAGATACTCACCGGCAACTTCTGCCAGT 13595 Query 33739 TTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTA 33798 |||||||| | || ||||||||||||||||| ||||| || ||||||| || || ||| Sbjct 13596 TTGCCAAACAGCACCACGCGGTGCCATTCAGTCTGCTCTTTCATCTCACCGGTCGCTTTA 13655 Query 33799 TCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCATG 33858 ||| ||| ||||| || ||||| | | | ||||||||| ||||| ||| | |||||| Sbjct 13656 TCACGCCAGGATTCGGAAGTAGCCAGCGTAATGTTGGCAACTGCGCCACCACTCGGCATG 13715 Query 33859 TATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGATTACTTTATTTACGCC 33914 || || ||||| ||||||||||| | | |||| || || || || |||||||| Sbjct 13716 TAGCGTACTTCCGGGTCCTGGCCCAGATTACCGACGAGAATCACCTTGTTTACGCC 13771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144969711535712