Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031940.1
Length=77375
Score E
Sequences producing significant alignments: (Bits) Value
seq960 143 1e-29
>seq960
Length=33163
Score = 143 bits (158), Expect = 1e-29
Identities = 286/418 (68%), Gaps = 8/418 (2%)
Strand=Plus/Plus
Query 7087 GAAAGCGGCGTGCTGCGTATTCAGCGGGATATCACGACGTACAGGAAAAATGCGTATGGT 7146
||| ||||| |||| || ||||| ||||| || ||| ||| || || | ||
Sbjct 18344 GAAGGCGGCTACGTGCGCATCCAGCGTTCGATCACTACCTACCAGAAGAACGCTTTCGGC 18403
Query 7147 GTGGCGGATAACAGCTACCTTGACAGCGAGACGCTGCATACCAGT--GCTTATGTGTTGC 7204
|||||| ||| |||||| ||||||||||| ||||| ||||| || || | |||
Sbjct 18404 CAGGCGGACAACTCCTACCTGGACAGCGAGACCCTGCA--CCAGTCGGCCTACATCGTGC 18461
Query 7205 GCCGTCTGAAATCTGTTATTACCAGTAAATACGGGCGCCATAAACTTGCTAATGATGGTA 7264
|||| ||| || || || ||||| || ||||||||||| || | || ||||| |
Sbjct 18462 GCCGCCTGCAAAGCGTGATCACCAGCAAGTACGGGCGCCACAAGTTGGCCGCCGATGGCA 18521
Query 7265 CGCGTTTCGGGTCTGGTCAGGCCATTGTCACGCCTGCCGTTATCCGTGGTGAGCTGGGAT 7324
| || ||||| | || ||| | || ||||| || | || || || |||||| ||
Sbjct 18522 CCCGCTTCGGCGCCGGCCAGCCGATCGTCACCCCGAGCACCATTCGCGGCGAGCTG--AT 18579
Query 7325 CAACATAT-CGCCA-GATGGAGCGGGAAGGCATCGTGGAAAACTTCGATCTGTTCCAGCA 7382
| | | ||||| | |||||| ||||||| ||||||||| ||| |||||| |
Sbjct 18580 CGCCCAGTACGCCAAGCTGGAGCTGGAAGGCCATGTGGAAAACGCCGAGCTGTTCGCCGA 18639
Query 7383 ACATCTGATAGTTGAGCGTAACGCGAACAATTCGAACCGCCTGGATGTGCTGTTTCCGCC 7442
|| ||| | || || || | || | |||||||| | | |||||||| |||||
Sbjct 18640 GCACCTGGTGGTGGAACGCGATGCCCGGGACCCGAACCGCATCAACGTGCTGTTCCCGCC 18699
Query 7443 TGATTATGTCAATCAGTTACGTGTGTTTGCAGTGCTTAACCAGTTCCGTCTGCAGTAC 7500
|| || |||| | || ||||| || |||| ||||||||||| |||||||||
Sbjct 18700 GGACTACATCAACGGCCTGCGAGTGTTCGCGCTGCTCAACCAGTTCCGCCTGCAGTAC 18757
Score = 143 bits (158), Expect = 1e-29
Identities = 286/418 (68%), Gaps = 8/418 (2%)
Strand=Plus/Plus
Query 46676 GAAAGCGGCGTGCTGCGTATTCAGCGGGATATCACGACGTACAGGAAAAATGCGTATGGT 46735
||| ||||| |||| || ||||| ||||| || ||| ||| || || | ||
Sbjct 18344 GAAGGCGGCTACGTGCGCATCCAGCGTTCGATCACTACCTACCAGAAGAACGCTTTCGGC 18403
Query 46736 GTGGCGGATAACAGCTACCTTGACAGCGAGACGCTGCATACCAGT--GCTTATGTGTTGC 46793
|||||| ||| |||||| ||||||||||| ||||| ||||| || || | |||
Sbjct 18404 CAGGCGGACAACTCCTACCTGGACAGCGAGACCCTGCA--CCAGTCGGCCTACATCGTGC 18461
Query 46794 GCCGTCTGAAATCTGTTATTACCAGTAAATACGGGCGCCATAAACTTGCTAATGATGGTA 46853
|||| ||| || || || ||||| || ||||||||||| || | || ||||| |
Sbjct 18462 GCCGCCTGCAAAGCGTGATCACCAGCAAGTACGGGCGCCACAAGTTGGCCGCCGATGGCA 18521
Query 46854 CGCGTTTCGGGTCTGGTCAGGCCATTGTCACGCCTGCCGTTATCCGTGGTGAGCTGGGAT 46913
| || ||||| | || ||| | || ||||| || | || || || |||||| ||
Sbjct 18522 CCCGCTTCGGCGCCGGCCAGCCGATCGTCACCCCGAGCACCATTCGCGGCGAGCTG--AT 18579
Query 46914 CAACATAT-CGCCA-GATGGAGCGGGAAGGCATCGTGGAAAACTTCGATCTGTTCCAGCA 46971
| | | ||||| | |||||| ||||||| ||||||||| ||| |||||| |
Sbjct 18580 CGCCCAGTACGCCAAGCTGGAGCTGGAAGGCCATGTGGAAAACGCCGAGCTGTTCGCCGA 18639
Query 46972 ACATCTGATAGTTGAGCGTAACGCGAACAATTCGAACCGCCTGGATGTGCTGTTTCCGCC 47031
|| ||| | || || || | || | |||||||| | | |||||||| |||||
Sbjct 18640 GCACCTGGTGGTGGAACGCGATGCCCGGGACCCGAACCGCATCAACGTGCTGTTCCCGCC 18699
Query 47032 TGATTATGTCAATCAGTTACGTGTGTTTGCAGTGCTTAACCAGTTCCGTCTGCAGTAC 47089
|| || |||| | || ||||| || |||| ||||||||||| |||||||||
Sbjct 18700 GGACTACATCAACGGCCTGCGAGTGTTCGCGCTGCTCAACCAGTTCCGCCTGCAGTAC 18757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 247469789109424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |