Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_032253.1 Length=2787 Score E Sequences producing significant alignments: (Bits) Value seq345 86.0 1e-13 >seq345 Length=370641 Score = 86.0 bits (94), Expect = 1e-13 Identities = 185/277 (67%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 1654 CATCTTCACCAGGATACCCCTACCTGCGTGAAGCACCTACTATTGGAAAATGGCTCAGGA 1713 |||| || ||||||| || ||| || | ||||| ||||| || ||||| ||| | ||| Sbjct 252933 CATCATCGCCAGGATGGCCATACATGAGGGAAGCGCCTACGATAGGAAAGTGGTTACGGA 252874 Query 1714 CGGACGAGTGTGGATCATTTGATCCAGTGCAAGTGGAGCGGCTATGGTATGACGTTAACA 1773 | ||| |||| | || | || |||||| || | |||||||| || | | Sbjct 252873 TCGGCGACGATGGAGAACCAGACGGGATCCAGGTGGAGAGGTTGTGGTATGATGTCCAGA 252814 Query 1774 TGGTCATGGCTGGCTCTTATGAGCACTTGTTCAGAGCATTCGTAAAGGACGAACCGCACA 1833 || | || |||||||| | |||||||| ||||| ||||| || ||||||| Sbjct 252813 GAGTACTATTAGGGGACTATGAGCATATATTCAGAGCGTTCGTTAAGGATGAGCCGCACA 252754 Query 1834 AAATAGCGAAAGCTAAGGAGAATAGGTGGCGATTAATCATTGCTTCCTCTCTCCCAGTGC 1893 | ||| || | | || | |||||| | || ||||| | |||| ||||||| Sbjct 252753 AGCAAGCCAAGGTTTTGGCTGGCAAGTGGCGGCTCATAATTGCGACTGCTCTGCCAGTGC 252694 Query 1894 AGATGGTCTGGCGAATGCTCTACACTGGACAGAATGA 1930 ||||||||||| ||| || | | ||||||||| Sbjct 252693 AGATGGTCTGGAAGATGTGCTTCGAGGAACAGAATGA 252657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8806227201920