Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq3937 93.3 4e-17 >seq3937 Length=228930 Score = 93.3 bits (102), Expect = 4e-17 Identities = 135/184 (73%), Gaps = 10/184 (5%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCG----AATACATTA 65 || |||| | |||| ||||||||| | | ||||||||| | | |||| ||||| | Sbjct 105285 ACGTTTATTCTGAATAAATTAGAGTGCTTAAAGCAGGC-TATCCTCGTCTGAATACTGCA 105343 Query 66 C-CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC-- 122 ||||||||||| ||||||||| | | ||||||||||| ||||| | ||| | || Sbjct 105344 TGCATGGAATAATGGAATAGGACTT-CTATTCTATTTTGTTGGTTT-TCGGAACCCCGAG 105401 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||| || | ||| | ||||| ||| | | ||||||||||| Sbjct 105402 GTAATGATTAATAGGGACAGATGAGGGCATTCGTATTGTGATGTTAGAAGTGAAATTCTT 105461 Query 183 GGAT 186 |||| Sbjct 105462 GGAT 105465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511976960800