Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq3937 96.9 2e-15 >seq3937 Length=228930 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/192 (72%), Gaps = 12/192 (6%) Strand=Plus/Plus Query 25606 GCTGGATTGTATTATATTGGTGAAAATGATAGTGTTAAATGTTTTGAATGTAACGTTACT 25665 ||||| |||||||||| || || | |||| || |||||||||||||| || ||| Sbjct 13746 GCTGGCTTGTATTATACCGGACAAGAGGATATAGTCAAATGTTTTGAATG---CGGGACT 13802 Query 25666 ATTATG---AAATGGGAAGAAGATGATGA-ACCTT--TAGCATGTCATAAAAGATGGTCT 25719 | || |||| ||||| |||||| || | ||| | ||| || ||||||| Sbjct 13803 GTCTTGGCTGGATGGTTAGAAGGTGATGACGCCATGATAGAA---CATCAACGATGGTCC 13859 Query 25720 GCAAGATGTCGATTTATTAGAAAAATTGCTTGTGGAAATGTTCCAATAGGTATTGATCCA 25779 | | ||||| ||||| || | || ||||| ||||||||| | ||||| || || ||||| Sbjct 13860 GGACGATGTAGATTTGTTCGCAATATTGCCTGTGGAAATATACCAATTGGCATCGATCCT 13919 Query 25780 AATACAGTACCA 25791 | |||||||||| Sbjct 13920 AGTACAGTACCA 13931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356504616796830