Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3664 163 5e-38 seq3674 152 9e-35 seq1746 143 5e-32 seq521 136 7e-30 seq12746 113 8e-23 seq300 109 1e-21 seq12842 107 4e-21 seq10628 98.7 2e-18 seq7078 89.7 9e-16 >seq3664 Length=1071 Score = 163 bits (180), Expect = 5e-38 Identities = 190/249 (76%), Gaps = 8/249 (3%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCAT 130 || ||||||||| |||||||||||||| ||||||| | ||| | |||||| ||||| Sbjct 706 CTGTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGGTATCTGCCTTGAATACTCCAGCAT 765 Query 131 GGAATAATA-GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||| | |||| ||| | | ||| | |||||||| ||| | |||||| Sbjct 766 GGAATAACAAGAAT--GACT--CTGGTCTTTCTTGTTGGTACAAAGGCTTGA-GTAATGG 820 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||| ||| | ||||||||| | ||||| | ||||||||||||||| ||||| Sbjct 821 TTAAGAGGAACAGTCGGGGGCATTCGTATTTGCCAGCTAGAGGTGAAATTCTTAGATTTG 880 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 881 GCAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 939 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 940 AGTTAGGGG 948 >seq3674 Length=1380 Score = 152 bits (168), Expect = 9e-35 Identities = 188/250 (75%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT---GCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | | || ||||| || |||| Sbjct 312 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCTAATGCCTGAATATTTTGTGCAT 253 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGT-TGGTTTCTAGGACC-GCCGTAATG 188 |||||||| ||||| ||| || | ||||| | | |||||| ||| | | |||||| Sbjct 252 GGAATAATGGAATAAGACCTGTG-TTCTACTCTCACTGGTTTTTAGATCAAGAAGTAATG 194 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 193 ATTAATAGGAGCAGTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCG 134 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 |||||||||| |||||||| || |||| ||||||||||||||||| |||||| Sbjct 133 TCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACGA 75 Query 309 AAGTTAGGGG 318 ||||||| || Sbjct 74 AAGTTAGAGG 65 >seq1746 Length=2199 Score = 143 bits (158), Expect = 5e-32 Identities = 186/250 (74%), Gaps = 8/250 (3%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT---GCTCGAATACATTA-GCAT 130 |||||||||| |||||||| || | ||||||||| | | || ||||| || |||| Sbjct 1888 TTACTTTGAACAAATTAGACTGCTTAAAGCAGGCTTCTAATGCCTGAATATTTTGTGCAT 1947 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGT-TGGTTTCTAGGACC-GCCGTAATG 188 |||||||| ||||| ||| | | ||||| ||| |||||| ||| | | |||||| Sbjct 1948 GGAATAATGGAATAAGACCAGTG-TTCTACTTTCACTGGTTTTTAGATCAAGAAGTAATG 2006 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 2007 ATTAATAGAAGCAGTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCG 2066 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 |||||||||| |||||||| || |||| ||||||||||||||||| |||||| Sbjct 2067 TCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACGA 2125 Query 309 AAGTTAGGGG 318 ||||||| || Sbjct 2126 AAGTTAGAGG 2135 >seq521 Length=12490 Score = 136 bits (150), Expect = 7e-30 Identities = 185/249 (74%), Gaps = 7/249 (3%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-TTTGCTC-GAATACATTA-GCATG 131 |||||||||| ||||||||||| | ||||| | ||| | | ||||| || ||||| Sbjct 9674 TTACTTTGAACAAATTAGAGTGCTTTAAGCACTCTATTTACACTGAATATTTTGTGCATG 9733 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATGA 189 ||||||| ||||| ||| | | |||||| ||| ||||||| ||| | | ||||||| Sbjct 9734 GAATAATGGAATAAGACCT-CTGTTCTACTTTCATTGGTTTTTAGATCAAGAGGTAATGA 9792 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||| ||| ||||| | |||||| | ||||||||||||||| || Sbjct 9793 TTAATAAAAGCAGTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTAGACCGT 9852 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||||||| |||||||| || |||| ||||||||||||||||| ||||||| Sbjct 9853 CGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACGAA 9911 Query 310 AGTTAGGGG 318 |||||| || Sbjct 9912 AGTTAGAGG 9920 >seq12746 Length=791 Score = 113 bits (124), Expect = 8e-23 Identities = 161/221 (73%), Gaps = 7/221 (3%) Strand=Plus/Plus Query 79 TTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT---GCTCGAATACATTA-GCATGGAA 134 |||||| ||||||||||| | ||||||||| | | || | ||| || | |||||| Sbjct 572 TTTGAAGAAATTAGAGTGCTTAAAGCAGGCTTCTAATGCCTGTATATTTTGTGTATGGAA 631 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATGATTA 192 |||| ||||| ||| | | |||||| ||| ||||||| ||| | | |||||||||| Sbjct 632 TAATGGAATAAGACCT-CTGTTCTACTTTCATTGGTTTTTAGATCAAGAGGTAATGATTA 690 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 |||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 691 ATAGAAGCAGTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCGTCGT 750 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCA 293 |||||||||| |||||||| || |||| |||||||||| Sbjct 751 AAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCA 791 >seq300 Length=83415 Score = 109 bits (120), Expect = 1e-21 Identities = 177/249 (71%), Gaps = 17/249 (7%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT---GCTCGAATACATTA-GCAT 130 |||||||||| |||||||| | | ||||||||| ||| || ||||| || |||| Sbjct 66213 TTACTTTGAACAAATTAGACTACTTAAAGCAGGCTTTTAATGCCTGAATATTTTGTGCAT 66154 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACCGCCGTAATGA 189 | ||||| ||||| || | || ||||| ||| ||||||| ||| | | || Sbjct 66153 TGGATAATGGAATAAAACCTCCG-TTCTACTTTCATTGGTTTTTAGATC-------AAGA 66102 Query 190 TTAATAGGGAT---AGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||| | ||| ||||| | |||||| | ||||||||||||||||||| Sbjct 66101 TTAATAGAAGTTGCAGTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGAT 66042 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 |||||||||| |||||| | || |||| ||||||||||||||||| ||| Sbjct 66041 CGTCGTAAGACTAACTCAAGCGAAAACATTTGCCAAAGATGTTTTCATTAATCA-AAAAC 65983 Query 307 GAAAGTTAG 315 |||||||| Sbjct 65982 TAAAGTTAG 65974 >seq12842 Length=788 Score = 107 bits (118), Expect = 4e-21 Identities = 160/221 (72%), Gaps = 7/221 (3%) Strand=Plus/Plus Query 79 TTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT---GCTCGAATACATTA-GCATGGAA 134 ||| || ||||||||||| | ||||||||| | | || | ||| || | |||||| Sbjct 569 TTTTAAGAAATTAGAGTGCTAAAAGCAGGCTTCTAATGCCTGTATATTTTGTGTATGGAA 628 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATGATTA 192 |||| ||||| ||| | | |||||| ||| ||||||| ||| | | |||||||||| Sbjct 629 TAATGGAATAAGACCT-CTGTTCTACTTTCATTGGTTTTTAGATCAAGAGGTAATGATTA 687 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 |||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 688 ATAGAAGCAGTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCGTCGT 747 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCA 293 |||||||||| |||||||| || |||| |||||||||| Sbjct 748 AAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCA 788 >seq10628 Length=851 Score = 98.7 bits (108), Expect = 2e-18 Identities = 104/136 (76%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 |||||||||||||| ||| ||||| | |||||| | | || |||||||||||| Sbjct 614 GTAATGATTAATAGAAGCAGTTGGGGGCATTAGTATTAAGACGCGAGCGGTGAAATTCTT 673 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 ||| |||||||||| |||||||| || |||| ||||||||||||||||| Sbjct 674 GGACCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-A 732 Query 303 GAACGAAAGTTAGGGG 318 ||||||||||||| || Sbjct 733 GAACGAAAGTTAGAGG 748 >seq7078 Length=1004 Score = 89.7 bits (98), Expect = 9e-16 Identities = 120/163 (74%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 158 TATTTTG-TTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||| ||||||| ||| | | |||||||||||||| | | ||||| | || Sbjct 587 TATTTTCATTGGTTTTTAGATCAAGAGGTAATGATTAATAGAAGCAATTGGGGGCATTAG 646 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGT 275 |||| | || ||||||||||||||| |||||||||| |||||||| | Sbjct 647 TATTACGACGCGAGCGGTGAAATTCTTGGACCGTCGTAAGACTAACTTAAGCGAAAGCAT 706 Query 276 TCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | |||| ||||||||||||||||| ||||||||||||| || Sbjct 707 TTGCCAAAGATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915065511360