Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1418 242 6e-62 seq3330 149 1e-33 seq521 149 1e-33 seq1617 145 1e-32 seq1429 140 5e-31 >seq1418 Length=2559 Score = 242 bits (268), Expect = 6e-62 Identities = 173/199 (87%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2361 TCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 2420 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135 |||||||| | | | || | | ||||||||||||||| | | |||| |||| Sbjct 2421 AAACTTCCTTGCGTTAGACACGCAAAGTCCCTCTAAGAAGACTATCTGAAACCTTAGTTT 2480 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 | | ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2481 CAGCGCCTAGTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 2540 Query 196 CCACCAACTAAGAACGGCC 214 ||||||||||||||||||| Sbjct 2541 CCACCAACTAAGAACGGCC 2559 >seq3330 Length=1456 Score = 149 bits (164), Expect = 1e-33 Identities = 93/100 (93%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 1050 GTCTCGTTCATTATCGGAATTAACCAGACAAATCACTCCACGAACTAAAAACGGCCATGC 1109 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||| |||| | || ||||||||||||||||||||| Sbjct 1110 ACCACCACTCATATATTCGAGAAAGAGCTATCAATCTGTC 1149 Score = 82.4 bits (90), Expect = 1e-13 Identities = 58/65 (89%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| | |||||||||||| |||||| |||||||||||||| ||||||||||||||| ||| Sbjct 797 TCATTTTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATTACAGACCTGTTATTG-CTC 855 Query 76 AAACT 80 || || Sbjct 856 AATCT 860 >seq521 Length=12490 Score = 149 bits (164), Expect = 1e-33 Identities = 93/100 (93%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| Sbjct 10266 GTCTCGTTCGTTATAGAAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 10207 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||| |||| | || ||||||||||||||||||||| Sbjct 10206 ACCACCACTCATATATTCGAGAAAGAGCTATCAATCTGTC 10167 Score = 84.2 bits (92), Expect = 3e-14 Identities = 84/106 (79%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||| ||||||||| |||||| |||||||||| ||| ||||||||||||||| || Sbjct 10521 TCATTGTAACGCGCGTGCAGCCCAGGACATCTAAGGACATTACAGACCTGTTATTG-TTC 10463 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 10462 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 10419 >seq1617 Length=2310 Score = 145 bits (160), Expect = 1e-32 Identities = 92/100 (92%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||| ||||| |||||||||||||||||||||||| ||||||||||| |||||| Sbjct 2095 GTCTCGTTCGATATCGCAATTAACCAGACAAATCACTCCACGAACTAAGAACGACCATGC 2154 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||| |||| | || ||||||||||||||||||||| Sbjct 2155 ACCACCACTCATATATTCGAGAAAGAGCTATCAATCTGTC 2194 >seq1429 Length=2543 Score = 140 bits (154), Expect = 5e-31 Identities = 91/100 (91%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||||||| Sbjct 245 GTCTCGTTTGTTATCGGAATTAACCAGGCAAATCACTCCACGAACTAAAAACGGCCATGC 304 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||| |||| | || ||||||| ||||||||||||| Sbjct 305 ACCACCACTCATATATTCGAGAAAGAACTATCAATCTGTC 344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796686569295