Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017-
01-04] 14,695 sequences; 208,907,727 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq501 298 9e-79
seq521 297 3e-78
seq820 212 1e-52
seq10187 201 2e-49
seq868 134 2e-29
seq601 95.1 2e-17
seq284 87.8 3e-15
>seq501
Length=14380
Score = 298 bits (330), Expect = 9e-79
Identities = 215/244 (88%), Gaps = 3/244 (1%)
Strand=Plus/Minus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 765 GTCATCAGTAGGATAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCAGGTTCCCT 706
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||
Sbjct 705 TGCA-TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 647
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 646 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTACCACAAGCCAGTTATC 587
Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATA 268
|||||||||||||||||| ||||||| | | ||| || | | ||||||||||||
Sbjct 586 CCTGTGGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGATA 528
Query 269 GGCC 272
||||
Sbjct 527 GGCC 524
>seq521
Length=12490
Score = 297 bits (328), Expect = 3e-78
Identities = 215/246 (87%), Gaps = 7/246 (3%)
Strand=Plus/Minus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|||||||||||| ||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct 765 GTCATCAGTAGGATAAAACTAAACTGTCTCACGACGGTCTAAACCCAGCTCAGGTTCCCT 706
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||
Sbjct 705 TGCA-TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 647
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 646 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 587
Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA---TTTCGAGGGACTAAAGGATCGA 266
|||||||||||||||||| ||||||| | | ||| ||| | | |||||||| |
Sbjct 586 CCTGTGGTAACTTTTCTGACACCTCTTGTTTAAAACTCTTTAAA---CCAAAAGGATCAA 530
Query 267 TAGGCC 272
||||||
Sbjct 529 TAGGCC 524
>seq820
Length=4513
Score = 212 bits (234), Expect = 1e-52
Identities = 156/179 (87%), Gaps = 2/179 (1%)
Strand=Plus/Minus
Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154
||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||
Sbjct 674 TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGACATC 615
Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 614 GAAGGATCAAAAAGCAATGTCGCTATGAACGCTTGGCTGCCACAAGTCAGTTATCCCTGT 555
Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATAGGCC 272
||||||||||||| ||||||| | | ||| || | | ||||||||||||||||
Sbjct 554 GGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGATAGGCC 497
>seq10187
Length=866
Score = 201 bits (222), Expect = 2e-49
Identities = 129/141 (91%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154
|||||||||||||||||| || ||||| |||||| |||||| ||||||||||||||
Sbjct 184 TGGGTGAACAATCCAACGTTTGGTGAATTTTGCTTCACAATGATATGAAGAGCCGACATC 243
Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 244 GAAGGATCAAAAATCAACGTCGCTATGAACGCTCGGCTGCCACAAGCCAGTTATCCCTGT 303
Query 215 GGTAACTTTTCTGGCACCTCT 235
||||||||||||| |||||||
Sbjct 304 GGTAACTTTTCTGACACCTCT 324
>seq868
Length=4194
Score = 134 bits (148), Expect = 2e-29
Identities = 96/109 (88%), Gaps = 1/109 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| |||| |||| ||||||||||||||||||||||||||||||
Sbjct 3363 TACTGAGCAGGATTACTATTGCAACGACTTGTCATCAGTAGGGTAAAACTAACCTGTCTC 3422
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC 108
| ||||||||||||||||||||||||||||||| | |||||||||| ||
Sbjct 3423 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAAGCC 3471
>seq601
Length=8162
Score = 95.1 bits (104), Expect = 2e-17
Identities = 105/139 (76%), Gaps = 6/139 (4%)
Strand=Plus/Plus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|| ||||||||| || ||||||||| ||| | ||||||||||| ||||||||| ||| |
Sbjct 2343 GTTATCAGTAGGATATAACTAACCTATCTTACGACGGTCTAAATCCAGCTCACCTTCGC- 2401
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
|| || ||||| | |||| |||| |||||| |||||| || |||||
Sbjct 2402 ATGGGTTTGTGAATTTT-----GCTTTGTAAATTTTGCTTCACAGTGATAGAAAAAGCCG 2456
Query 150 ACATCGAAGGATCAAAAAG 168
||||||||| |||||||||
Sbjct 2457 ACATCGAAGTATCAAAAAG 2475
>seq284
Length=99535
Score = 87.8 bits (96), Expect = 3e-15
Identities = 94/122 (77%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98
||| ||| || ||| ||| || |||||||||| | || |||||||||| | ||||
Sbjct 331 AGGATAACACAAACTTGTTACACGACGGTCTAATCTGAGTTCACGTTCCCCTACA-TGGG 389
Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158
|||| |||||||| ||| |||| |||||| || |||| |||||||||||||||||
Sbjct 390 TGAAAAATCCAACCCTTCGTCAATTTTGCTTCAAAAT-ATAGAAAGAGCCGACATCGAAG 448
Query 159 GA 160
||
Sbjct 449 GA 450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854274445920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |