Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1418 246 6e-63 seq3330 154 3e-35 seq521 120 6e-25 seq8897 95.1 2e-17 >seq1418 Length=2559 Score = 246 bits (272), Expect = 6e-63 Identities = 213/259 (82%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| | || || | | | |||||||||||||||||||||||||||| Sbjct 2460 CTTCTTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTG 2401 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||||||||||||| |||||||||||||||||| ||||||||| || Sbjct 2400 ATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCGTTCAACGAGTTTATT- 2342 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA-ACTCTGTCGTGCTGGGGATAGAGCATT 249 |||| ||| || |||||||||| ||| || | ||||| |||||||||| ||| Sbjct 2341 CCTTACCCGATGGGGTTGGGTAATCTCTTTAGTACGCA-TCGTGATGGGGATAGACGATT 2283 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||||||||| ||||||||||||||| |||||||||| | ||||||||| | | |||| Sbjct 2282 GCAATTATTCGTCTTCAACGAGGAATTCCTAGTAAGCACAAGTCATCAGCTTGTGCTGAT 2223 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 2222 TACGTCCCTGCCCTTTGTA 2204 >seq3330 Length=1456 Score = 154 bits (170), Expect = 3e-35 Identities = 170/223 (76%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| ||||||||||||||| |||||||||||||| |||||| |||||||||||| Sbjct 860 AGATTGAG-CAATAACAGGTCTGTAATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTAA 802 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | ||| || ||||| || || ||| | ||| |||||||||||| | | || | Sbjct 801 AATGAAAGTATCAACGTGT--ATTTCCTAGACCGAGAGGTCTGGGTAAACCGCTGAATCA 744 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || || |||| ||||| | | | || || | || | | | ||| ||||| || |||||| Sbjct 743 CTTTCATGCTTGGGATTGTGAACTGAAACTGTT-CACATGAACCTGGAATTCCCAGTAAG 685 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| |||| | ||| |||||||||||||||||||||||| Sbjct 684 TGCGAATCATTAATTCGCATTGATTACGTCCCTGCCCTTTGTA 642 >seq521 Length=12490 Score = 120 bits (132), Expect = 6e-25 Identities = 153/208 (74%), Gaps = 7/208 (3%) Strand=Plus/Plus Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174 ||||||||||||||| ||| |||||||||| |||||| ||||||||| |||| ||| || Sbjct 10466 CAATAACAGGTCTGTAATGTCCTTAGATGTCCTGGGCTGCACGCGCGTTACAATGAAAGT 10525 Query 175 GCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGC 234 ||||| || || ||| | |||||||||||| | | || | || || ||| Sbjct 10526 ATCAACGTGT--ATTTCCT----AGAGAGGTCTGGGTAAACCGCTGAATCACTTTCATGC 10579 Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294 | ||||| | | | || || | || | | | ||| ||||| || |||||| ||| ||| Sbjct 10580 TTGGGATTGTGAACTGAAACTGTT-CGCATGAACCTGGAATTCCCAGTAAGTGCGAATCA 10638 Query 295 TCAGCACGCGTTGATTACGTCCCTGCCC 322 | | ||| |||||||||||||||||| Sbjct 10639 TTAATTCGCATTGATTACGTCCCTGCCC 10666 >seq8897 Length=914 Score = 95.1 bits (104), Expect = 2e-17 Identities = 126/173 (73%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 156 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC 215 ||||||||||| ||| || ||||| || || ||| | ||| |||||||||||| | Sbjct 914 CGCGCGCTACAATGAAAGTATCAACGTGT--ATTTCCTAGACCGAGAGGTCTGGGTAAAC 857 Query 216 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAAT 275 | || | || || |||| ||||| | | | || || | || | | | ||| ||||| Sbjct 856 CGCTGAATCACTTTCATGCTTGGGATTGTGAACTGAAACTGTT-CACATGAACCTGGAAT 798 Query 276 GCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || |||||| ||| |||| | ||| |||||||||||||||||||||||| Sbjct 797 TCCCAGTAAGTGCGAATCATTAATTCGCATTGATTACGTCCCTGCCCTTTGTA 745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947060808960