Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq11988 192 9e-47 >seq11988 Length=5545 Score = 192 bits (212), Expect = 9e-47 Identities = 180/224 (80%), Gaps = 9/224 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| | Sbjct 4810 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 4867 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||||| | | |||| | || Sbjct 4868 CTCGTTCACGGGGAACAATTGCAAGCCCCGATCCCTAGCACGAAGGAGGTTCAGCGGGTT 4927 Query 120 ACCCGGA----CCTGTCGGCCAAGGT--GATAGACTCGTTGAATACATCAGTGTAGCGCG 173 |||||| ||| |||||| || || || || ||| | | ||||||||||||| Sbjct 4928 ACCCGGTAGAGCCTCTCGGCCCGGGAACGAATTACACGCTGATTCCTTCAGTGTAGCGCG 4987 Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||||||||||||||||||||||||||||||||||||||| || Sbjct 4988 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATCGC 5031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751512946755