Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq11988 134 6e-29 >seq11988 Length=5545 Score = 134 bits (148), Expect = 6e-29 Identities = 101/119 (85%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||| |||||||||||||||||||||||| | ||| ||||| ||| |||||| ||| Sbjct 2184 GTTGGTACCCGAAAGATGGTGAACTATGCCCGGCCAGGATGAAGTCAGGGGAAACCCTGA 2125 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| ||||||| ||||| ||||||||||||||||| | ||||||||||||||| Sbjct 2124 TGGAGGTCCGCAGCGATTCTGACGTGCAAATCGATCGTCTGAGCTGGGTATAGGGGCGA 2066 Score = 132 bits (146), Expect = 2e-28 Identities = 131/165 (79%), Gaps = 7/165 (4%) Strand=Plus/Minus Query 21 CGTGTGAA--GCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGT 78 || ||||| |||||| | |||||| |||| ||| || |||||| |||| ||| ||| Sbjct 3026 CGGGTGAACCGCTCCT---AAGAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGCGGGTGGT 2970 Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCG 137 ||| | | ||||| |||||||| | ||| ||||||||||||| ||||||| |||| | Sbjct 2969 AAACTCCATCTAAGGCTAAATAC-GACCACGAGACCGATAGCGGACAAGTACCGTGAGGG 2911 Query 138 AAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 |||| ||||||| |||||| | ||||||||||| || |||||||| Sbjct 2910 AAAGTTGAAAAGAACTTTGAAGAGAGAGTTAAACAGTACGTGAAA 2866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078565917350