Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1377 275 1e-71 seq56586 82.4 1e-13 >seq1377 Length=879 Score = 275 bits (304), Expect = 1e-71 Identities = 191/216 (88%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 || |||||||||||||||||||||||||||| | || |||||||||||||||||||| | Sbjct 879 CACGACGGTCTAAACCCAGCTCACGTTCCCTGTAAGCGGGTGAACAATCCAACGCTTGGC 820 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 ||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 819 GAATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCT 760 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 759 ATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTCGC 700 Query 239 CTCAAA--TTTCGAGGGACTAAAGGATCGATAGGCC 272 ||| ||| |||| | |||||||| ||||| Sbjct 699 TGAAAACTCTTCAGCGGACGAGAGGATCGAGAGGCC 664 >seq56586 Length=1371 Score = 82.4 bits (90), Expect = 1e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 56 TCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGC 113 || || |||||||||||||||||||||||||||| | || |||||||||||||||||| Sbjct 58 TCCCACGACGGTCTAAACCCAGCTCACGTTCCCTGTAAGCGGGTGAACAATCCAACGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853828773792