Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq11988 197 3e-48 >seq11988 Length=5545 Score = 197 bits (218), Expect = 3e-48 Identities = 178/221 (81%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 5031 GCGATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGG 4972 Query 174 AGCCAACGAGTTCATCA--CCTTGGCCGGAAGG-TCT---GGGTAATCTTGTTAAACTCT 227 | || || || || || ||||| ||| ||| |||||| | | || ||| Sbjct 4971 AATCAGCGTGTAATTCGTTCCCGGGCCGAGAGGCTCTACCGGGTAACCCGCTGAACCTCC 4912 Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 ||||||| ||||| | | |||||||| || | | | |||||||||| || |||||||| Sbjct 4911 TTCGTGCTAGGGATCGGGGCTTGCAATTGTTCCCCGTGAACGAGGAATTCCCAGTAAGCG 4852 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||||||| |||||||||||||||||||||||||||| Sbjct 4851 CGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 4811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946566730496