Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq42836 289 9e-76 >seq42836 Length=3129 Score = 289 bits (320), Expect = 9e-76 Identities = 236/283 (83%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | || ||| || ||||| ||||| | ||||||||| Sbjct 1007 GTACTCATTCCGATTACGGGGCCTCGAATGAGTCCCGTATCGTTATTTTTCGTCACTACC 1066 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1067 TCCCCGAGCTGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 1126 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct 1127 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACCACCACGGT 1186 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | | |||||| |||| |||||||| |||||| ||||||| || | ||||||| Sbjct 1187 AGGCGTCGAACCTACCGTCGACAGTTGATAAGGCAGACATTTGAAAGATACGTCGCCGGT 1246 Query 240 TC-AAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA 279 | ||| || |||||| | | |||||||| || ||||||| Sbjct 1247 ACGAAGACCGTGCGATCAGCTCGAAGTTATTCAGAGTCACCAA 1289 Score = 192 bits (212), Expect = 2e-46 Identities = 143/164 (87%), Gaps = 4/164 (2%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAA 401 |||||||||||||||||||||||||| |||||||| ||| || ||||| ||| || | Sbjct 1439 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTG-GGTACGATCTAAGGA 1497 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGA 460 || ||||||||||||||||||| ||||| ||||||| ||| | || |||| ||| ||| Sbjct 1498 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCGTACTGGACGGCTTGCACTGAGA 1557 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1558 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509390191872