Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1867 206 4e-51 seq2106 201 2e-49 seq885 197 2e-48 seq1389 168 1e-39 seq3753 129 9e-28 seq880 123 4e-26 seq901 109 8e-22 seq3527 100 4e-19 seq2321 87.8 3e-15 >seq1867 Length=22164 Score = 206 bits (228), Expect = 4e-51 Identities = 206/258 (80%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||| | Sbjct 14231 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATAACTCGCGCTTACTGGGAATT-C 14288 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 |||||| | | ||||||||||| | |||| | ||||| | | |||| || || Sbjct 14289 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCNTAGCACGAAGGAGGTTCAGCAGGTT 14348 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || ||| ||| |||| || || | || || ||| | | ||||||||||||||||||| Sbjct 14349 ACTCGGGCCTTTCGGTCAGGGA---ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 14405 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 14406 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 14462 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 14463 AGCCGCCTGTCCCTCTAA 14480 >seq2106 Length=19525 Score = 201 bits (222), Expect = 2e-49 Identities = 205/258 (79%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||||||||| || ||||||||||||| |||||| | Sbjct 9447 GTACAAAGGGCAGGGACGTAATCACCGCGAGCTT-ATTACTCGCGCTTACTGGGAATT-C 9390 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | || ||||||||||| | ||||| ||||| | | |||| | || Sbjct 9389 CTCGTTTATGAGAAACAATTGCAAGCCCCAATCCCTGGCACGAAGGAGGTTCAGCGGGTT 9330 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| | | |||| || || | || || ||| | | ||||||||||||||||||| Sbjct 9329 ACCCGGGCNTTTCGGTCAGGGA---ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 9273 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 9272 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 9216 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 9215 AGCCGCCTGTCCCTCTAA 9198 >seq885 Length=44800 Score = 197 bits (218), Expect = 2e-48 Identities = 204/258 (79%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||| |||| |||||||||||||||| |||||| | Sbjct 37167 GTACAAAGGGCAGGGACGTAATCACCGCGGGCTT-ATGACTCGCGCTTACTGGGAATT-C 37224 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | || ||||||||||| | ||||| | ||||| | |||| | || Sbjct 37225 CTCGTTCATGAGAAACAATTGCAAGCTCCAATCCCTAGCACGAAAGAGGTTCAGCGGGTT 37284 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| |||| || || | || || ||| | | |||||||||||||||||| Sbjct 37285 ACCCGAGCCTTTCGGTCAGGGA---ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCN 37341 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 37342 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 37398 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 37399 AGCCGCCTGTCCCTCTAA 37416 >seq1389 Length=39678 Score = 168 bits (186), Expect = 1e-39 Identities = 199/258 (77%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| |||||| ||||| ||||||| || ||||||||||||| |||| ||| Sbjct 31314 GTACAAAGGGCAGAGACGTAATCAACCCGAGCTT-ATAACTCGCGCTTACT-GGAAATTC 31257 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT- 119 |||||| | | ||||||||||| | |||| | ||| | || |||| | Sbjct 31256 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCTTAACACAAAAAAGGTTCAGCGGGGC 31197 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || ||| ||| |||| || | || | || || ||| | | ||||||||||||||||||| Sbjct 31196 ACTCGGGCCTTTCGGTCA--GAGA-ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 31140 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 || |||||||||||||||||||| ||||||||||||| ||||| || |||| | ||| | Sbjct 31139 GCTCAGAACATCTAAGGGCATCATAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 31083 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 31082 AGCCGCCTGTCCCTCTAA 31065 >seq3753 Length=7174 Score = 129 bits (142), Expect = 9e-28 Identities = 189/258 (73%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| ||||| |||||| | |||| |||||| |||||||||| ||||| |||||| | Sbjct 1039 GTACAAAAGGCAGAGACGTAATTAACGTGAGCTT-ATGACTCGCGTTTACTGGGAATT-C 1096 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | |||| | ||| | | | |||| | || Sbjct 1097 CTCGTTCATGGGGAACAATTGCAAGCCCCACTCCCTAGCACAAAGGAGGTTCAGCGGGTT 1156 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| | |||| | | | || || ||| | | ||||||||||||||||||| Sbjct 1157 ACCCGGGTTTTTCGGTGAGGCA---ACACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 1213 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 |||| |||||| ||| |||| |||| |||||||| ||||| || |||| | ||| | Sbjct 1214 ACCCAAAACATCAAAGAGCATTGCAGATTTGTTATTG-CTCAATCT--CGTGCGGCTAGA 1270 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 1271 AGCCGCCTGTCCCTCTAA 1288 >seq880 Length=49736 Score = 123 bits (136), Expect = 4e-26 Identities = 188/258 (73%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| ||||| |||||| | |||| |||||| |||||||||| ||||| |||||| | Sbjct 41384 GTACAAAAGGCAGAGACGTAATTAACGTGAGCTT-ATGACTCGCGTTTACTGGGAATT-C 41441 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||| | | | |||| | || Sbjct 41442 CTCGTTTATGGGGAACAATTGCAAGCCCCAATCCCTAGCACAAAGGAGGTTCAGCGGGTT 41501 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| | |||| | | | || || ||| | | | ||||||||||||||| | Sbjct 41502 ACCCGGTTTTTTCGGTGAGGCA---ACACACGCTGATTCCTTTAGTGTAGCGCGCGTGTG 41558 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 |||| |||||| ||| |||| |||| |||||||| ||||| || |||| | ||| | Sbjct 41559 ACCCAAAACATCAAAGAGCATTGCAGATATGTTATTG-CTCAATCT--CGTGCGGCTAGA 41615 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 41616 AGCCGCCTGTCCCTCTAA 41633 >seq901 Length=49467 Score = 109 bits (120), Expect = 8e-22 Identities = 138/184 (75%), Gaps = 7/184 (4%) Strand=Plus/Minus Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTC 132 ||||||||||| | |||| | ||| | ||| |||| | |||| || || || Sbjct 27843 AACAATTGCAAGCCCCAATCCTTAGCACAAAGAAGGTTCAGCGGGTTACTCGAGTCTTTC 27784 Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 || || || | || || ||| | | |||||||||||||||||||||||||||||||| Sbjct 27783 GGTCAGGGA---ACACACGCTGATTTCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 27727 Query 193 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGC-CATCTCCCT 251 ||||||||||||||| |||||||| ||||| ||| | || ||| ||| | | | ||||| Sbjct 27726 AAGGGCATCACAGACTTGTTATTG-CTCAATCTTGTGCGG-CTAGAAGCCGCCTGTCCCT 27669 Query 252 CGAA 255 | || Sbjct 27668 CTAA 27665 >seq3527 Length=12440 Score = 100 bits (110), Expect = 4e-19 Identities = 90/108 (83%), Gaps = 5/108 (5%) Strand=Plus/Minus Query 150 CGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 209 || ||| | | ||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 984 CGCTGATTTCTTCATTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATTACAGACCT 925 Query 210 GTTATTGCCTCAAACTTCCGTG-GCCTAAAAGGC-CATCTCCCTCGAA 255 ||||||| ||||| || |||| | ||| ||| | | | |||||| || Sbjct 924 GTTATTG-CTCAATCT--CGTGCGGCTAGAAGCCGCCTGTCCCTCTAA 880 >seq2321 Length=22588 Score = 87.8 bits (96), Expect = 3e-15 Identities = 55/58 (95%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATT 58 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| Sbjct 19293 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT 19349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751952239540