Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq885 143 1e-31 seq2106 138 5e-30 seq1389 136 2e-29 seq6072 131 7e-28 seq318 122 4e-25 seq2738 116 2e-23 seq1320 114 5e-23 seq2869 111 7e-22 seq1363 111 7e-22 seq901 100 1e-18 seq1867 96.9 1e-17 seq673 95.1 5e-17 seq889 91.5 6e-16 >seq885 Length=44800 Score = 143 bits (158), Expect = 1e-31 Identities = 130/161 (81%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| |||| |||||| | | ||||| ||||||| Sbjct 34035 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 33976 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| ||||||| |||| ||||| | ||||| |||||| | Sbjct 33975 AC-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTAAAAAGAACTTTGAA 33917 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||| || || |||||||| ||| ||||| || || Sbjct 33916 AAGAGAGTTCAAGAGTACGTGAAACCGTTCAAAGGTAAACG 33876 Score = 127 bits (140), Expect = 9e-27 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||||||||||||||||||||||||||||||| ||| |||| ||| |||||| ||| | Sbjct 31515 TTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGGGGAAACCCTGAT 31456 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| || |||| ||||| ||||||||||||||||| | ||||||||| ||||| Sbjct 31455 GGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTATAGTGGCGA 31398 >seq2106 Length=19525 Score = 138 bits (152), Expect = 5e-30 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||| ||| ||| || ||||||||||| |||| |||||| | | ||||| ||||||| Sbjct 11770 GAGTCGAATTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 11829 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 11830 A-CGACCACGAGACCGATAGCGAACAAGTACCGTGAGAGAAAGTTGAAAAGAACTTTGAA 11888 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||||| | ||||| |||| |||| ||| | ||| || Sbjct 11889 GAGAGAGGTCAAAAGTACGTAAAATCGTTCAGAGGTAA 11926 Score = 100 bits (110), Expect = 1e-18 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||| ||| |||||| |||||||||||||||| ||| |||| ||| Sbjct 12623 AGAGCGTACACGTTGAGACTCGAAAGGTGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 12682 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 |||||| ||| |||||| || |||| ||||| |||||||||| |||||| Sbjct 12683 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCAATCGTC 12732 >seq1389 Length=39678 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 34398 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 34457 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 34458 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 34517 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 34518 ATAGGGGCGA 34527 Score = 118 bits (130), Expect = 4e-24 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||| ||| ||| || ||||||||||| |||| |||||| | | ||||| ||||||| Sbjct 33545 GAGTCGAATTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 33604 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | |||||| ||||| ||||||| |||| ||||| |||||| |||||| | Sbjct 33605 ACAATCACGAGACCAATAGCAAACAAGTACCGTGAGGGAAAGTTGAAAAAAACTTTGAAG 33664 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 33665 AGAGAGTTCAAGAGTACGTGAAA 33687 >seq6072 Length=1319 Score = 131 bits (144), Expect = 7e-28 Identities = 117/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| |||| |||||| | ||||| ||||||| Sbjct 197 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCTATCTAAGGCTAAAT 138 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 137 AC-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 79 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 78 GAGAGAGTTCAAGAGTACGTGAAA 55 >seq318 Length=146526 Score = 122 bits (134), Expect = 4e-25 Identities = 137/179 (77%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 7 ACCGGTGGCCTAGCCGTGTGAAGCTC-CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCT 65 ||||||| || ||| || || | || || | |||||| |||| ||| || ||||||| Sbjct 116406 ACCGGTG--CTCGCCTTGGGAGGATCTCTCCTTAGAGTCGGGTTGCTTGAGAGTGCAGCT 116349 Query 66 CTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAG--AGACCGATAGCGCAC 123 |||| |||| |||||| | | || || |||||||| || | | ||||| |||||| || Sbjct 116348 CTAAGTGGGTGGTAAACTCCATCGAAGGCTAAATA--GGACCGCAAGACCAATAGCGAAC 116291 Query 124 AAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 ||||| |||| ||||| ||||||| |||||| | |||||||| || || |||||||| Sbjct 116290 AAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAAGAGTACGTGAAA 116232 Score = 118 bits (130), Expect = 4e-24 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 115528 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 115469 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| |||||||||| |||||| | | ||| Sbjct 115468 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCAATCGTCGGAACTAGGT 115409 Query 674 ATAGG 678 ||||| Sbjct 115408 ATAGG 115404 >seq2738 Length=13236 Score = 116 bits (128), Expect = 2e-23 Identities = 122/158 (77%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||| ||| || | ||||| ||| || | ||||| | | ||||||||||||| Sbjct 10571 GAGTCGGATTGCTTGAGAGTACAGCTTTAAGTGAGTTGTAAACTCCATCTAAAGCTAAAT 10512 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| |||||||||||| ||||||| || | ||||| ||||||| ||| || | Sbjct 10511 AC-GACCACGAGACCGATAGCAAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTGTGAA 10453 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 || |||||| ||||| ||||||||| ||| | ||| || Sbjct 10452 AAAAGAGTTCAAAAGTACGTGAAATCGTTTAGAGGTAA 10415 >seq1320 Length=32015 Score = 114 bits (126), Expect = 5e-23 Identities = 135/178 (76%), Gaps = 5/178 (3%) Strand=Plus/Plus Query 6 GACCGGTGGCCTAGCCGTGTGAAGCTCCTT-CGACGAGTCGAGTTGTTTGGGAATGCAGC 64 |||||||| || ||| || || | || || | |||||| |||| ||| || |||||| Sbjct 11573 GACCGGTG--CTCGCCTTGGGAGGATCTTTTCTTAGAGTCGGGTTGCTTGAGAGTGCAGC 11630 Query 65 TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA-GAGACCGATAGCGCAC 123 ||||| ||| |||||| | | ||||| |||||||| | ||| || ||||||||| || Sbjct 11631 TCTAAGTGGATGGTAAACTCCATCTAAGGCTAAATA-CGACCACGATACCGATAGCAAAC 11689 Query 124 AAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAA 181 ||||| || | ||||| ||||||| |||||| | |||||||| || | ||||||| Sbjct 11690 AAGTACCGTAAAGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAAGAATACGTGAA 11747 >seq2869 Length=17987 Score = 111 bits (122), Expect = 7e-22 Identities = 97/118 (82%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| |||| |||||| | | ||||| ||||||| Sbjct 1070 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 1129 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 | | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| Sbjct 1130 A-CGACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTG 1186 >seq1363 Length=30746 Score = 111 bits (122), Expect = 7e-22 Identities = 134/180 (74%), Gaps = 3/180 (2%) Strand=Plus/Minus Query 4 GTGACCGGTGGCCTAGCCGTGTGAAGCTC-CTTCGACGAGTCGAGTTGTTTGGGAATGCA 62 |||||||||| || ||| || || | || || | |||||| |||| ||| || |||| Sbjct 11551 GTGACCGGTG--CTCGCCTTGGGAGGATCTCTCCTTAGAGTCGGGTTGCTTGAGAGTGCA 11494 Query 63 GCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCA 122 ||||||| | || |||||| | | ||||| ||||| | | || ||||||||| | Sbjct 11493 GCTCTAAGTAGGTGGTAAACTCCATCTAAGACTAAACACAACCACGAAACCGATAGCAAA 11434 Query 123 CAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 |||||| |||| || || | ||||| |||||||| |||||||| || || |||||||| Sbjct 11433 CAAGTACCGTGAAAGACAGTTAAAAAGAACTTTGGAGAGAGAGTTCAAGAGTACGTGAAA 11374 Score = 107 bits (118), Expect = 8e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||||||||||||||||||||||||||| | | ||| ||| ||| ||| || || Sbjct 10652 GTTGGGACCCGAAAGATGGTGAACTATGCTTAGACAGGACAAAGTCAGGGGACACATTGA 10593 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 |||| | ||| |||| ||||| ||| ||||||||||||| || ||||||||| ||| Sbjct 10592 TGGACGTTCGTAGCGATTCTGACGTACAAATCGATCGTCGAAACTGGGTATAGAGGC 10536 >seq901 Length=49467 Score = 100 bits (110), Expect = 1e-18 Identities = 94/117 (80%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 41 AGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATA 100 ||||| |||| ||| || |||||||||| |||| |||||| | | ||||| |||||||| Sbjct 28811 AGTCGGGTTGCTTGAGAGTGCAGCTCTATGTGGGTGGTAAACTCCATCTAAGGCTAAATA 28870 Query 101 TTGGCCAGA-GACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 | ||| | ||||||||||| ||||||| |||| ||||| ||||||| |||||| Sbjct 28871 C-GACCACAAGACCGATAGCGAACAAGTACCGTGAAGGAAAGTTGAAAAGAACTTTG 28926 Score = 95.1 bits (104), Expect = 5e-17 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || ||||||||||||||||||||||||||| |||| ||| ||| ||| Sbjct 31056 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATACCTGGTAAGGACAAAGTCAGG 31115 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||| || ||| |||||| || |||| ||||| |||| |||| ||| || | ||||| Sbjct 31116 GGATACCCTGATGGAGGTCCGTAGCGATTCTGACGTGGAAATGGATTCTCGGAACTGGGT 31175 Query 674 ATAGGGGCGA 683 |||| |||| Sbjct 31176 ATAGAAGCGA 31185 >seq1867 Length=22164 Score = 96.9 bits (106), Expect = 1e-17 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| || | |||||| | | ||||| |||||| Sbjct 11989 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGAGTGGTAAACTCCATCTAAGGCTAAAC 11930 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | || ||| ||||| ||||||| ||| ||||| |||||| |||||| | Sbjct 11929 ACAACCACGAAACCAATAGCAAACAAGTACCTTGAGGGAAAGTTGAAAAAAACTTTGAAG 11870 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || | |||||| Sbjct 11869 AGAGAGTTCAAGAGTATGTGAAA 11847 >seq673 Length=72440 Score = 95.1 bits (104), Expect = 5e-17 Identities = 116/158 (73%), Gaps = 8/158 (5%) Strand=Plus/Plus Query 47 GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATA------ 100 |||| ||| || ||||||||||| | || |||||| | ||||| |||||||| Sbjct 38687 GTTGCTTGAGAGTGCAGCTCTAAGTAGGTGGTAAACTCTATCTAAGGCTAAATAATCGGT 38746 Query 101 -TTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| |||||| ||||| ||||||| |||| |||| ||||||| |||||| | Sbjct 38747 CTCGACCACGAGACCAATAGCAAACAAGTACCGTGAGGAAAAGTTGAAAAGAACTTTGAA 38806 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||||||| || || || ||||| ||| | ||| || Sbjct 38807 GAGAGAGTTCAAGAGTACATGAAACCGTTCAGAGGTAA 38844 Score = 86.0 bits (94), Expect = 3e-14 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||| |||| || |||| ||| |||| || Sbjct 39527 AGAGCGTACACGTTGGGACCCGAAAGATGACGAACAATTCCTGGTCAGGACGAAGTTAGG 39586 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 ||||||||| | ||| || |||| ||||| ||||||||||||||||| Sbjct 39587 AGAAACTCTGATAAAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTC 39636 >seq889 Length=44483 Score = 91.5 bits (100), Expect = 6e-16 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || ||||||| | ||| |||||||| ||||| || ||| |||| ||| Sbjct 27375 AGAGCGTACACGTTGGGAGGCAAAAAATGGTGAATTATGCTTGGTCAGGACGAAGTCAGG 27434 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| ||||| || | | ||||| ||||||||||||| ||| | ||||| Sbjct 27435 GGAAACCCTGATGGAGATCCGTAATGATTCTGACGTGCAAATCGATTGTCGGAACTGGGT 27494 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 27495 ATAGGGGCGA 27504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079859373800