Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq707 318 1e-84 seq1724 313 4e-83 seq885 307 2e-81 seq1867 302 8e-80 seq1363 298 9e-79 seq2938 289 5e-76 seq2106 264 2e-68 seq889 239 8e-61 seq901 226 5e-57 seq598 150 3e-34 seq589 125 1e-26 seq3838 122 1e-25 >seq707 Length=55548 Score = 318 bits (352), Expect = 1e-84 Identities = 242/283 (86%), Gaps = 5/283 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||||| | ||||| || | ||| |||||||||||||||||||||||||||||| Sbjct 26013 TACTAAGCAGGATTACTATCGCAATGACCAGTCATCAGTAGGGTAAAACTAACCTGTCTC 25954 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||| ||| || | |||||||||||| | |||| || Sbjct 25953 ACGACGGTCTAAACCCAGCTCACGTTTCCTGTTGGCAGGTGAACAATCCGATGCTTGGCG 25894 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 25893 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 25834 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| || Sbjct 25833 TGAACGCTTGGCCGCCACAAGCNAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 25774 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 25773 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 25733 >seq1724 Length=27161 Score = 313 bits (346), Expect = 4e-83 Identities = 241/283 (85%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| ||| ||||||| |||||||||||||||||||||| Sbjct 11682 TACTGAGCAGGATTACTATTGCAATGACCAGTCATCAATAGGGTAAAACTAACCTGTCTC 11741 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || | ||||||||||| | |||||| || Sbjct 11742 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTGAACAATACGACGCTTGGCG 11801 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 11802 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGTGACGTCGCTA 11861 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| | || Sbjct 11862 TGAACGCTTGGCCGCCACAAGCCAGTTATCTCTGTGGTAACTTTTCTGACACCTTTTGCT 11921 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 11922 GAAAACTCTTCAA--GTCAAAAGGATCGATAGGCCGTGCTTTC 11962 >seq885 Length=44800 Score = 307 bits (340), Expect = 2e-81 Identities = 221/253 (87%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 20090 GTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 20149 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 || | ||||||||||||| || ||| |||||||||||| | |||||||||||||||| Sbjct 20150 GTTGGCGGGTGAACAATCCGACCCTTGGCGAATTCTGCTTTGCAATGATAGGAAGAGCCG 20209 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||| Sbjct 20210 ACATCGAAAGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGTCAGTTATC 20269 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA--TTTCGAGGGACTAAAGGATCGAT 267 | |||||||||||||||| ||||||| || ||| ||| || | ||||||||||| Sbjct 20270 CTTGTGGTAACTTTTCTGACACCTCTTGCTGAAAACTCTTCAAGCTA--AAAGGATCGAT 20327 Query 268 AGGCCACACTTTC 280 ||||| ||||| Sbjct 20328 AGGCCGTGCTTTC 20340 >seq1867 Length=22164 Score = 302 bits (334), Expect = 8e-80 Identities = 207/232 (89%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| ||| |||||||||||||||||||||||||||||| Sbjct 4676 TACTGAGCAGGATTACTATTGCAATGACCAGTCATCAGTAGGGTAAAACTAACCTGTCTC 4735 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || | ||||||||||||| |||||| || Sbjct 4736 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 4795 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 4796 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGTGACGTTGCTA 4855 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||||||||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct 4856 TGAACGCTTGGCCGCCACAAGCCAGTTATCTCTGTGGTAACTTTTCTGACAC 4907 >seq1363 Length=30746 Score = 298 bits (330), Expect = 9e-79 Identities = 238/283 (84%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| ||||||| || | ||| |||||||||| |||||||||||||||||| Sbjct 7796 TACTGAGCAGAATTACTATCGCAATGACCAGTCATCAGTAAAGTAAAACTAACCTGTCTC 7855 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||| |||||||| ||||||||||| ||| || | ||||||||||||| || ||| || Sbjct 7856 ACGACAGTCTAAACTCAGCTCACGTTTCCTGTTGGCGGGTGAACAATCCGACACTTGGCG 7915 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||||||| Sbjct 7916 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCAAAGGATGAAAAAGCGACGTCGCTA 7975 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 7976 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 8035 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 8036 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 8076 >seq2938 Length=11758 Score = 289 bits (320), Expect = 5e-76 Identities = 231/275 (84%), Gaps = 5/275 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| || |||||||||||||||||||||| |||| || Sbjct 4018 TACTGAGCAGGATTACTATTGCAATAACCAGTCATCAGTAGGGTAAAACTAATCTGTTTC 4077 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||| |||||||||||||||||||| || | ||||||||||||| |||||| || Sbjct 4078 ACGACGGTCAAAACCCAGCTCACGTTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 4137 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||| |||||||||||||| || |||||| Sbjct 4138 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATTGAAGGATCAAAAAGTGACATCGCTA 4197 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| |||| ||||||||||| ||||| |||||||||||| ||||||| || Sbjct 4198 TGAACGCTTGGCCGCCATAAGCCAGTTATTCCTGTAGTAACTTTTCTGACACCTCTTGCT 4257 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCC 272 ||| ||| | | | |||||||||||||||| Sbjct 4258 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCC 4290 >seq2106 Length=19525 Score = 264 bits (292), Expect = 2e-68 Identities = 225/274 (82%), Gaps = 5/274 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| ||||||||||||||||| |||||||||||| Sbjct 15760 TACTGAGCAGGATTACTATCGCAATGACCAGTCATCAGTAGGGTAAATCTAACCTGTCTC 15701 Query 60 ATGACGGTCTAAACCC-AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 | |||||||||||||| |||||||||| | | || | ||||||| ||| |||||| | Sbjct 15700 ACGACGGTCTAAACCCCAGCTCACGTTTCTTGTTGGCGGGTGAA---TCCGACGCTTGGC 15644 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||| |||||||||||||||||||||| ||||||||||||| |||| ||| Sbjct 15643 AAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGGAGGATCAAAAAGCGACGTTGCT 15584 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||| |||||||| ||||||||||||||||||||||| || || ||| || Sbjct 15583 ATGAACGCTTGGCCGCCACAAGTCAGTTATCCCTGTGGTAACTTTTTTGACATTTCTTGC 15524 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||| | | |||||||||||||||| Sbjct 15523 TGAAAATTCTTTAAGCCAAAAGGATCGATAGGCC 15490 >seq889 Length=44483 Score = 239 bits (264), Expect = 8e-61 Identities = 178/206 (86%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| || Sbjct 13545 ATCAGTAGAGTAAAACTAACCTGTCTCACGACGGTCTAAACCGT-CTCACGTTCCCTGTT 13603 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | |||| |||||||| |||||| |||||||||||| | ||||||||||||||||||| Sbjct 13604 GGCGGGTAAACAATCCGACGCTTGGCGAATTCTGCTTTGCAATGATAGGAAGAGCCGACA 13663 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||||||| |||||| |||| |||||||| ||||||| ||||||| | |||||||||| Sbjct 13664 TCGAAGGATCGAAAAGCGACGTTGCTATGAATGCTTGGCCGCCACAAACTAGTTATCCCT 13723 Query 213 GTGGTAACTTTTCTGGCACCTCTAGC 238 || |||||||||| | || ||| || Sbjct 13724 GT-GTAACTTTTCCGACATTTCTTGC 13748 >seq901 Length=49467 Score = 226 bits (250), Expect = 5e-57 Identities = 219/275 (80%), Gaps = 6/275 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||||||||||||||||||| |||||||| Sbjct 36793 TACTGAGCAGGATTACTATCGCAATGACCAGTCATCAGTAGGGTAAAACTGACCTGTCTT 36734 Query 60 -ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 | |||||| |||||||| |||||||||||| || | ||||||||||||| |||||| | Sbjct 36733 GACGACGGTTTAAACCCATCTCACGTTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGC 36674 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 ||||||| | | ||| |||||||| |||||||| || |||||||||| |||||||| Sbjct 36673 ATATTCTGCCTTGCAATGGTAGGAAGATCCGACATCAAAATATCAAAAAGCGACGTCGCT 36614 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||| | ||||||| |||||| | ||||| |||||||| ||||||| | Sbjct 36613 ATGAACGCTTGGCCGTCACAAGCAAGTTAT--TTTTGGTATCTTTTCTGACACCTCTTG- 36557 Query 239 CTCAAATTTCGAGGGAC-TAAAGGATCGATAGGCC 272 || ||| || | || |||| ||||||||||| Sbjct 36556 CTGAAAACTCTACAAACAAAAAGAATCGATAGGCC 36522 >seq598 Length=64868 Score = 150 bits (166), Expect = 3e-34 Identities = 160/209 (77%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| || |||||||| ||||| |||||||||| Sbjct 38770 TACTGAGCAGGATTACTATCGCAATGACCAGTTATCAGTAGAATAAAATTAACCTGTCTT 38829 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||| ||||| ||||||||| | || | | || || ||| |||||| | Sbjct 38830 ACGACGGTCTAATCCCAGTTCACGTTCCTTGTTGGCGAGTAAA---TCCGACGCTTGGCA 38886 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||| |||| | || ||||||| | |||||| ||| ||| ||||||| | || |||| Sbjct 38887 AATTCCGCTTTGCAATAATAGGAAAAATCGACATTGAAAGATGAAAAAGCTATGTTGCTA 38946 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||| | |||||||||||||| |||||| Sbjct 38947 TGAACACGTGGCTGCCACAAGCTAGTTAT 38975 >seq589 Length=66172 Score = 125 bits (138), Expect = 1e-26 Identities = 87/98 (89%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 ||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct 49864 TAGGAAGAGTCGACATCGAAGGATCAAAAAGCAATATCGCTATGAACACTTGGCCGCCAC 49923 Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCT 235 || ||||||||||||||| ||| |||||| || |||| Sbjct 49924 AAACCAGTTATCCCTGTGATAA--TTTCTGACATCTCT 49959 Score = 118 bits (130), Expect = 2e-24 Identities = 97/117 (83%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||| | Sbjct 49643 GTCATCAGTAGGATAAAACTAACCTGTTTCACGACGGTCTAAACCCAGCTCACGTTCCTT 49702 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146 || | || | |||||||| | ||| |||||||||||| | || ||| ||||| Sbjct 49703 GTTGGCGGATAAACAATCCGA--CTTGGCGAATTCTGCTTTGCAATTATAATAAGAG 49757 >seq3838 Length=6782 Score = 122 bits (134), Expect = 1e-25 Identities = 93/109 (85%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||||||||||||||||||||||||||||| Sbjct 4835 TACTGAGCAGGATTACTATCGCAATGACCAGTCATCAGTAGGGTAAAACTAACCTGTCTC 4894 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC 108 | |||||||||||||||||||||||||||| || | |||||||||| || Sbjct 4895 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTGAACAAACC 4943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854343985536