Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2106 77.0 4e-12 seq885 77.0 4e-12 seq1867 75.2 1e-11 seq905 75.2 1e-11 >seq2106 Length=19525 Score = 77.0 bits (84), Expect = 4e-12 Identities = 82/105 (78%), Gaps = 5/105 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGC-TAATGTATTCGGGC 68 ||||||||||||||| || | |||||||||||||||| ||||| | |||||| ||| Sbjct 8612 AAACCAACAAAATAGAACCG-ATGTCCTATTCTATTATTTCATGCACACAGTATTCAGGC 8554 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | | |||||||||| || |||||||| |||| ||||| || Sbjct 8553 GAAGCTAGCCTGCTTTACGCATTCTAATTTGTTCAAAGTAAACGT 8509 >seq885 Length=44800 Score = 77.0 bits (84), Expect = 4e-12 Identities = 82/105 (78%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| ||||||||||| | |||||| ||| Sbjct 38002 AAACCAACAAAATAGAACCG-AGATCCTATTCTGTTATTCCATGCACACAGTATTCAGGC 38060 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||| | ||||||||||| |||| ||||| || Sbjct 38061 AAAGCTAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 38105 >seq1867 Length=22164 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/106 (77%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 9 GAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATG-TATTCGGG 67 |||||||||||||||| || | ||||||||| |||||||||||| | ||||| | Sbjct 15059 GAAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACACAATATTCAGA 15117 Query 68 CGTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || | | |||| ||| ||||||||||||| |||| ||||| || Sbjct 15118 CGAAGCTAACCTGTTTTAAACACTCTAATTTGTTCAAAGTAAACGT 15163 >seq905 Length=44647 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 6/105 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGC-TAATGTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 18377 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 18435 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||| | |||||||||| |||| ||||| || Sbjct 18436 NAAGCTAGCCTGCTTTAAGCACTCTAATTAGTTCAA-GTAAACGT 18479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595162198104