Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq63 100 2e-16 >seq63 Length=804878 Score = 100 bits (110), Expect = 2e-16 Identities = 157/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 ||||| || || ||||| || | || |||||| ||||| ||||||| || | Sbjct 4757 TTGTTTAACGCGATCGAAACTCTCCCTTGCGTGAAGAAAAAAGCTAATTGGGCGTTACAA 4816 Query 61456 TGGATC-ACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 |||||| | || | | || | || ||| ||||| | || ||||| || | |||||| Sbjct 4817 TGGATCCATCACGAGAGCG-CAACGTTTCCCGAACGTGTACTCGCATTCGCAGCGGTCGA 4875 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 ||| | || ||||| || |||||||| ||||||||||| ||||| || || |||| Sbjct 4876 GGGAATCTTCTTCAGCGGCAGTTTTGCCGCGATCTTTTGGTTAAAGAAGCGAGGGGTTAT 4935 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||| || || || ||||||||||| | || || || || || Sbjct 4936 GCCAGGCCTTACTTTCAGCAATGAACTCATCTCGCGAGATGA 4977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397536233819840