Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_032851.1 Length=6891 Score E Sequences producing significant alignments: (Bits) Value seq351 78.8 4e-11 >seq351 Length=138681 Score = 78.8 bits (86), Expect = 4e-11 Identities = 187/279 (67%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 1764 TAGATCGGAACAAACATCATGGGAAGATTGTGATGACGGAAATGGGGGATGAAATGACT- 1822 ||||| || ||||||||||| ||| || |||| || ||||| ||||||| || Sbjct 121902 TAGATAGGGCTAAACATCATGGCCGGATGGTCCTGACCGATATGGG---TGAAATGGCTC 121846 Query 1823 --AGGGCTTTACGGGATCCTGAAGACAAAACAGGTCTGATAAATTTAAACCGGAGTAGAA 1880 | |||| || | ||||| || || |||| || | || | ||| |||||||| Sbjct 121845 TGAAGGCTCCGAGGAACCCTGACGATAAGTCAGGGTTGGTTAACATCAACAAGAGTAGAA 121786 Query 1881 ATATATATAACTATATCGTAGGAGGAGGAAGTCTCGCTCAGAGTGTTAATCATTGTAAC- 1939 | |||| || ||| | |||| |||| || |||||| | | || | | ||| Sbjct 121785 ACATATTCAATTATGTTGTAGTGGGAGCCTCGCTTGCTCAG-GCGACAACAAGTCCAACG 121727 Query 1940 TCGAGTGATTGGAGAGAACTGGGCCTCAGGATATGTTTATATGACGATCTAAGAGAGAGA 1999 | | |||||||| || | || || ||| | ||| | ||||| || | | ||||| Sbjct 121726 TTGTCAGATTGGAGGGAGTTAGGACTTAGGGTGTGTATGTATGATGACATGCGTGAGAGG 121667 Query 2000 AGATTTACACAGCCTACTGGTGTCGATTGGGCTATCGCA 2038 ||| | |||||||||| || || || |||||||| ||| Sbjct 121666 AGAGTGTCACAGCCTACCGGAGTTGACTGGGCTATAGCA 121628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 21934382110320